Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
- plastid 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400070819 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48380.1 | PGSC0003DMT400070819 | AT1G71830.1 | 19616764 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400070694 | Potato | cytosol | 41.42 | 91.04 |
| PGSC0003DMT400070657 | Potato | peroxisome, plasma membrane, plastid | 64.38 | 74.81 |
| PGSC0003DMT400070664 | Potato | cytosol, plasma membrane, plastid | 54.08 | 68.29 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 88.2 | 62.94 |
| PGSC0003DMT400070667 | Potato | cytosol | 29.83 | 62.9 |
| PGSC0003DMT400075494 | Potato | plasma membrane | 51.07 | 40.89 |
| PGSC0003DMT400075495 | Potato | plasma membrane | 50.0 | 39.63 |
| VIT_05s0094g01290.t01 | Wine grape | mitochondrion | 10.09 | 36.72 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 30.04 | 34.91 |
| Bra038824.1-P | Field mustard | cytosol | 24.68 | 34.74 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 33.05 | 32.91 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 16.52 | 32.77 |
| Bra037490.1-P | Field mustard | plastid | 32.83 | 32.69 |
| PGSC0003DMT400071183 | Potato | plasma membrane | 40.56 | 30.83 |
| Bra020705.1-P | Field mustard | plasma membrane | 35.84 | 30.25 |
| Zm00001d007277_P001 | Maize | plasma membrane | 35.84 | 28.45 |
| EES09539 | Sorghum | plasma membrane | 36.7 | 28.31 |
| KRH42000 | Soybean | vacuole | 23.39 | 28.24 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 25.11 | 27.99 |
| EES19530 | Sorghum | plasma membrane | 36.27 | 27.89 |
| TraesCS4A01G229800.1 | Wheat | plasma membrane | 35.84 | 27.56 |
| TraesCS3A01G401000.1 | Wheat | cytosol | 10.09 | 27.33 |
| CDX85334 | Canola | plasma membrane | 36.48 | 27.29 |
| TraesCS1B01G269900.1 | Wheat | plasma membrane | 35.41 | 27.27 |
| HORVU4Hr1G014760.3 | Barley | plasma membrane | 35.41 | 27.23 |
| TraesCS4D01G084000.1 | Wheat | plasma membrane | 35.41 | 27.23 |
| TraesCS4B01G086300.1 | Wheat | plasma membrane | 35.41 | 27.23 |
| HORVU1Hr1G064780.1 | Barley | plasma membrane | 34.76 | 26.82 |
| CDY48749 | Canola | plasma membrane | 35.84 | 26.81 |
| AT5G48380.1 | Thale cress | plasma membrane | 35.62 | 26.77 |
| CDY05685 | Canola | plasma membrane | 35.84 | 26.72 |
| Zm00001d038195_P001 | Maize | plasma membrane | 35.62 | 26.35 |
| TraesCS1D01G259400.1 | Wheat | plasma membrane | 34.12 | 26.32 |
| TraesCS1A01G259600.1 | Wheat | plasma membrane | 34.12 | 26.28 |
| PGSC0003DMT400058291 | Potato | plasma membrane | 32.83 | 24.88 |
| PGSC0003DMT400003278 | Potato | plasma membrane | 31.33 | 24.29 |
| PGSC0003DMT400017876 | Potato | plasma membrane | 30.9 | 23.53 |
| CDX69430 | Canola | extracellular | 10.3 | 20.08 |
| PGSC0003DMT400085762 | Potato | extracellular | 8.58 | 19.05 |
| KXG33866 | Sorghum | cytosol | 9.87 | 18.7 |
| CDY38095 | Canola | plasma membrane | 10.52 | 18.49 |
| TraesCS3D01G395600.1 | Wheat | endoplasmic reticulum, vacuole | 8.58 | 18.35 |
| CDX85492 | Canola | plasma membrane | 10.52 | 18.28 |
| CDY38092 | Canola | plasma membrane | 10.52 | 18.28 |
| TraesCS3D01G396100.1 | Wheat | plasma membrane | 10.09 | 17.67 |
| TraesCS3A01G401300.1 | Wheat | cytosol | 9.01 | 17.5 |
| TraesCS3B01G433700.1 | Wheat | plasma membrane | 9.87 | 17.42 |
| TraesCS3D01G395100.1 | Wheat | extracellular, plasma membrane | 9.66 | 17.24 |
| Zm00001d039672_P001 | Maize | plasma membrane | 9.44 | 17.19 |
| TraesCS3B01G434100.1 | Wheat | plasma membrane | 9.87 | 17.04 |
| TraesCS3A01G400800.1 | Wheat | extracellular | 9.66 | 16.92 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 7.3 | 16.92 |
| TraesCS3B01G434000.1 | Wheat | plasma membrane | 9.44 | 16.86 |
| TraesCS3B01G434200.1 | Wheat | plasma membrane | 9.87 | 16.85 |
| HORVU3Hr1G090040.1 | Barley | extracellular, plasma membrane | 8.8 | 16.4 |
| TraesCS3D01G395700.1 | Wheat | plasma membrane | 9.44 | 16.36 |
| Os01t0891601-01 | Rice | extracellular, golgi, plasma membrane | 9.01 | 16.28 |
| PGSC0003DMT400093490 | Potato | extracellular | 9.23 | 16.1 |
| TraesCS7A01G410600.1 | Wheat | extracellular | 9.01 | 16.03 |
| TraesCS3A01G401200.1 | Wheat | plasma membrane | 9.23 | 15.93 |
| TraesCS3D01G395900.1 | Wheat | extracellular, golgi, plasma membrane | 8.58 | 15.81 |
| TraesCS3A01G400700.1 | Wheat | extracellular, plasma membrane | 9.01 | 15.73 |
| CDY07991 | Canola | plasma membrane | 8.58 | 15.44 |
| TraesCS3A01G401100.1 | Wheat | extracellular, plasma membrane | 9.44 | 15.33 |
| Bra001255.1-P | Field mustard | plasma membrane | 8.15 | 14.67 |
| TraesCS3D01G395400.1 | Wheat | extracellular, golgi, plasma membrane | 7.51 | 14.29 |
| TraesCS3B01G433900.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 9.23 | 13.92 |
| Bra006366.1-P | Field mustard | mitochondrion | 9.66 | 13.85 |
| TraesCS3B01G433800.1 | Wheat | extracellular | 6.65 | 13.78 |
| TraesCS3A01G400900.1 | Wheat | extracellular, plasma membrane | 7.94 | 12.94 |
| TraesCS3D01G395800.1 | Wheat | plastid | 9.66 | 12.68 |
| CDX70708 | Canola | extracellular, plasma membrane, vacuole | 9.66 | 12.57 |
| Bra040380.1-P | Field mustard | extracellular | 5.36 | 10.64 |
| Os01t0891300-01 | Rice | plasma membrane, plastid | 0.21 | 0.28 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf |
| InterPro:LRR_dom_sf | UniProt:M1CMI3 | PFAM:PF07714 | EnsemblPlantsGene:PGSC0003DMG400027469 | PGSC:PGSC0003DMG400027469 | EnsemblPlants:PGSC0003DMT400070666 |
| PFscan:PS50011 | PANTHER:PTHR44101 | PANTHER:PTHR44101:SF1 | InterPro:Prot_kinase_dom | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | TMHMM:TMhelix | UniParc:UPI000295168D | SEG:seg | : | : |
Description
Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400027469]
Coordinates
chr7:-:1880275..1882369
Molecular Weight (calculated)
52328.5 Da
IEP (calculated)
7.283
GRAVY (calculated)
0.004
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDLSSNLLS GAIPSNIANC SFLNSVRLDS NKLDGPIPAE IGSLNRLKNF NVANNMLTGP VRRFINATFP PESYANNAGL CGSPLKACVT KRIGFHHILL
101: STVLNRRVQF ACGFVTGWSL FTVLGIYLFF LGLPGVKKML LFINKRTKVM VIDGNESPQR EEVNNDPKIL KMEKIVTRMS FLELSKVTLN FSQDNEIGNG
201: MLGKVYKALV PNGWTVAIKR FHVSEDLEEE FVSEITTLGS LRHPNLVPLI GFCSERDERI LVYKYMPNGN LHEWLHSTDD KARLLDFNLR VKIVLGVAKA
301: LTWLHDGGNF HVVHSNISTQ CILLNENFDP KLSNFWEATL AKTNDIDSNL SLFPIVECLD FTTYKKDVYR FGVVLLELLT RKKSYILSCS SLNLSSSSFA
401: SPLDVDKLLL GQGFDNMVMQ LLELASDCMK FIPDQRPTMQ QVYQTVAAIA RVHDQTEDSE IQLHVD
101: STVLNRRVQF ACGFVTGWSL FTVLGIYLFF LGLPGVKKML LFINKRTKVM VIDGNESPQR EEVNNDPKIL KMEKIVTRMS FLELSKVTLN FSQDNEIGNG
201: MLGKVYKALV PNGWTVAIKR FHVSEDLEEE FVSEITTLGS LRHPNLVPLI GFCSERDERI LVYKYMPNGN LHEWLHSTDD KARLLDFNLR VKIVLGVAKA
301: LTWLHDGGNF HVVHSNISTQ CILLNENFDP KLSNFWEATL AKTNDIDSNL SLFPIVECLD FTTYKKDVYR FGVVLLELLT RKKSYILSCS SLNLSSSSFA
401: SPLDVDKLLL GQGFDNMVMQ LLELASDCMK FIPDQRPTMQ QVYQTVAAIA RVHDQTEDSE IQLHVD
001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
Arabidopsis Description
Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.