Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48380.1 | CDX68299 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDX72833 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDX96350 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDY36679 | AT1G71830.1 | 19616764 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006366.1-P | Field mustard | mitochondrion | 67.04 | 73.85 |
| CDY38095 | Canola | plasma membrane | 51.68 | 69.81 |
| CDX85492 | Canola | plasma membrane | 52.23 | 69.78 |
| CDY38092 | Canola | plasma membrane | 51.4 | 68.66 |
| CDX69430 | Canola | extracellular | 44.41 | 66.53 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 33.8 | 60.2 |
| TraesCS3D01G395600.1 | Wheat | endoplasmic reticulum, vacuole | 31.01 | 50.92 |
| TraesCS3A01G401300.1 | Wheat | cytosol | 31.28 | 46.67 |
| TraesCS3D01G395900.1 | Wheat | extracellular, golgi, plasma membrane | 32.68 | 46.25 |
| Os01t0892300-01 | Rice | extracellular, golgi, plasma membrane | 35.47 | 45.52 |
| TraesCS3D01G395700.1 | Wheat | plasma membrane | 34.08 | 45.35 |
| TraesCS3D01G395400.1 | Wheat | extracellular, golgi, plasma membrane | 30.17 | 44.08 |
| CDY07991 | Canola | plasma membrane | 31.84 | 44.02 |
| TraesCS3B01G434200.1 | Wheat | plasma membrane | 33.24 | 43.59 |
| KXG33866 | Sorghum | cytosol | 29.89 | 43.5 |
| TraesCS3A01G400800.1 | Wheat | extracellular | 32.12 | 43.23 |
| TraesCS3D01G396100.1 | Wheat | plasma membrane | 32.12 | 43.23 |
| TraesCS3A01G400700.1 | Wheat | extracellular, plasma membrane | 32.12 | 43.07 |
| TraesCS3B01G434100.1 | Wheat | plasma membrane | 32.4 | 42.96 |
| TraesCS3B01G433700.1 | Wheat | plasma membrane | 31.28 | 42.42 |
| TraesCS3A01G401200.1 | Wheat | plasma membrane | 31.84 | 42.22 |
| TraesCS3D01G395100.1 | Wheat | extracellular, plasma membrane | 30.45 | 41.76 |
| TraesCS7A01G410600.1 | Wheat | extracellular | 30.17 | 41.22 |
| KRH66279 | Soybean | cytosol | 20.39 | 39.89 |
| TraesCS3B01G434000.1 | Wheat | plasma membrane | 29.05 | 39.85 |
| HORVU3Hr1G090040.1 | Barley | extracellular, plasma membrane | 27.65 | 39.6 |
| Zm00001d039672_P001 | Maize | plasma membrane | 27.93 | 39.06 |
| Os01t0891601-01 | Rice | extracellular, golgi, plasma membrane | 27.93 | 38.76 |
| TraesCS3A01G401000.1 | Wheat | cytosol | 18.44 | 38.37 |
| TraesCS3B01G433800.1 | Wheat | extracellular | 24.02 | 38.22 |
| TraesCS3A01G401100.1 | Wheat | extracellular, plasma membrane | 29.61 | 36.93 |
| TraesCS3A01G400900.1 | Wheat | extracellular, plasma membrane | 29.05 | 36.36 |
| TraesCS3B01G433900.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 30.17 | 34.95 |
| TraesCS3D01G395800.1 | Wheat | plastid | 33.52 | 33.8 |
| Os01t0891700-01 | Rice | plasma membrane | 26.82 | 31.37 |
| PGSC0003DMT400070667 | Potato | cytosol | 18.99 | 30.77 |
| CDX85197 | Canola | plastid | 17.04 | 27.48 |
| CDY05959 | Canola | extracellular, plasma membrane | 20.39 | 26.45 |
| CDX81298 | Canola | extracellular, plasma membrane | 17.6 | 25.93 |
| VIT_05s0094g01290.t01 | Wine grape | mitochondrion | 9.22 | 25.78 |
| CDY18672 | Canola | mitochondrion, plasma membrane | 17.32 | 25.51 |
| CDY48749 | Canola | plasma membrane | 43.85 | 25.2 |
| CDY05685 | Canola | plasma membrane | 43.3 | 24.8 |
| CDX85334 | Canola | plasma membrane | 39.66 | 22.79 |
| AT5G48380.1 | Thale cress | plasma membrane | 38.83 | 22.42 |
| KRH66278 | Soybean | cytosol | 26.82 | 20.91 |
| KRH21657 | Soybean | cytosol | 24.58 | 20.8 |
| Os05t0414700-01 | Rice | plasma membrane | 34.08 | 20.1 |
| TraesCS1B01G269900.1 | Wheat | plasma membrane | 33.24 | 19.67 |
| EES19530 | Sorghum | plasma membrane | 32.4 | 19.14 |
| HORVU1Hr1G064780.1 | Barley | plasma membrane | 31.84 | 18.87 |
| TraesCS1A01G259600.1 | Wheat | plasma membrane | 31.84 | 18.84 |
| TraesCS1D01G259400.1 | Wheat | plasma membrane | 31.56 | 18.71 |
| Zm00001d007277_P001 | Maize | plasma membrane | 30.45 | 18.57 |
| KRH40243 | Soybean | plasma membrane | 31.84 | 18.48 |
| PGSC0003DMT400070664 | Potato | cytosol, plasma membrane, plastid | 18.99 | 18.43 |
| KRH07291 | Soybean | plasma membrane | 31.01 | 18.08 |
| PGSC0003DMT400075494 | Potato | plasma membrane | 29.33 | 18.04 |
| PGSC0003DMT400075495 | Potato | plasma membrane | 29.61 | 18.03 |
| Zm00001d038195_P001 | Maize | plasma membrane | 31.56 | 17.94 |
| VIT_00s0220g00120.t01 | Wine grape | plasma membrane | 31.01 | 17.87 |
| KRH00983 | Soybean | nucleus, plasma membrane | 30.73 | 17.8 |
| PGSC0003DMT400071183 | Potato | plasma membrane | 29.89 | 17.46 |
| EES09539 | Sorghum | plasma membrane | 29.33 | 17.38 |
| Solyc06g082920.2.1 | Tomato | plasma membrane | 29.33 | 17.13 |
| VIT_00s2085g00010.t01 | Wine grape | plasma membrane | 29.61 | 17.12 |
| CDX86433 | Canola | plasma membrane | 26.54 | 16.96 |
| PGSC0003DMT400070657 | Potato | peroxisome, plasma membrane, plastid | 18.99 | 16.96 |
| HORVU4Hr1G014760.3 | Barley | plasma membrane | 27.93 | 16.5 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 18.44 | 16.46 |
| CDY04020 | Canola | plasma membrane | 27.65 | 16.45 |
| TraesCS4B01G086300.1 | Wheat | plasma membrane | 27.37 | 16.17 |
| TraesCS4D01G084000.1 | Wheat | plasma membrane | 27.37 | 16.17 |
| TraesCS4A01G229800.1 | Wheat | plasma membrane | 26.82 | 15.84 |
| CDY47244 | Canola | plasma membrane | 26.54 | 15.81 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 28.49 | 15.62 |
| CDY16228 | Canola | plasma membrane | 25.98 | 15.53 |
| CDY14686 | Canola | plasma membrane | 25.7 | 15.41 |
| KRH42002 | Soybean | plasma membrane | 26.54 | 15.06 |
| CDY38780 | Canola | plasma membrane | 25.14 | 15.0 |
| KRH41999 | Soybean | cytosol, golgi, plasma membrane | 25.42 | 14.8 |
| CDY11627 | Canola | plasma membrane | 24.3 | 14.62 |
| Solyc12g096710.1.1 | Tomato | plasma membrane | 28.77 | 12.76 |
| Os11t0249900-01 | Rice | plasma membrane | 17.04 | 12.18 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 13.13 | 10.04 |
| PGSC0003DMT400070666 | Potato | plastid | 12.57 | 9.66 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 10.61 | 9.09 |
| KRH66274 | Soybean | plasma membrane | 8.1 | 6.43 |
| KRH66277 | Soybean | plasma membrane | 8.1 | 6.43 |
| KRH42000 | Soybean | vacuole | 3.63 | 3.37 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 1.68 | 2.55 |
| KRH37646 | Soybean | cytosol | 1.68 | 2.46 |
| KRH66275 | Soybean | mitochondrion, plasma membrane | 1.68 | 2.41 |
| KRG88547 | Soybean | cytosol | 1.96 | 2.15 |
| Solyc12g096720.1.1 | Tomato | cytosol | 0.84 | 2.11 |
| Os01t0891300-01 | Rice | plasma membrane, plastid | 1.96 | 1.95 |
| KRH21659 | Soybean | cytosol | 1.12 | 1.69 |
| CDX85198 | Canola | golgi, plasma membrane | 1.68 | 1.58 |
| KRH49900 | Soybean | cytosol | 1.12 | 1.57 |
| PGSC0003DMT400070694 | Potato | cytosol | 0.84 | 1.42 |
| KRH21660 | Soybean | cytosol | 0.28 | 0.63 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:A0A078C6S0 | EnsemblPlants:CDX70708 | ProteinID:CDX70708 | ProteinID:CDX70708.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00140573001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF08263 | PFAM:PF13516 | SUPFAM:SSF52058 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EDD7C8 | SEG:seg | : | : |
Description
BnaC03g07920D
Coordinates
chrLK031791:+:1637303..1642970
Molecular Weight (calculated)
39169.0 Da
IEP (calculated)
4.717
GRAVY (calculated)
0.099
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MCIITLFTTC LCFLLVSTFT GADEDNVNCL RSIKSQVEDP NGYLSSWVFR NVTEGSICKF SGFTGQLPPE LASLRRLATF LAADYQLTCP GLCGWPIDYC
101: IEQEEKVIRF GKIGAAVSAP VGTFLGCFTC ANEADVKCLR TIHSQVKDPN GYLTSWVFGN KTAGYICKFS GVTCWHDDEN RVLSIKLGGY GLEGEFPQGI
201: KNCTDLTALD LSRNNFSGVL PSDIASLVPT VTFLDLSYNQ FSGEIPASLP NTTFLNTLML QHNQFTGQLP PELASLRRLA AFSVADNQLT GPIPKFNEEH
301: LKIGVDDFAN NEGLCGQPMD ACVEPDEDMI RFGKMGAAVG AVLFAPLVAY LRLVCHRW
101: IEQEEKVIRF GKIGAAVSAP VGTFLGCFTC ANEADVKCLR TIHSQVKDPN GYLTSWVFGN KTAGYICKFS GVTCWHDDEN RVLSIKLGGY GLEGEFPQGI
201: KNCTDLTALD LSRNNFSGVL PSDIASLVPT VTFLDLSYNQ FSGEIPASLP NTTFLNTLML QHNQFTGQLP PELASLRRLA AFSVADNQLT GPIPKFNEEH
301: LKIGVDDFAN NEGLCGQPMD ACVEPDEDMI RFGKMGAAVG AVLFAPLVAY LRLVCHRW
001: MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g69990 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.