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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68299
CDX72702
CDX72833
CDX73996
CDX78272
CDX90332
CDX96350
CDY02896
CDY07941
CDY12143
CDY22207
CDY36679
CDY41316
CDY41581
CDY41977
CDY53185
CDY54618
CDY55834
CDY61658
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G71830.1 CDX68299 AT1G71830.1 11397085
AT1G71830.1 CDX72833 AT1G71830.1 11397085
AT1G71830.1 CDX96350 AT1G71830.1 11397085
AT1G71830.1 CDY36679 AT1G71830.1 11397085
AT1G71830.1 CDX68299 AT1G71830.1 16621602
AT1G71830.1 CDX72833 AT1G71830.1 16621602
AT1G71830.1 CDX96350 AT1G71830.1 16621602
AT1G71830.1 CDY36679 AT1G71830.1 16621602
AT1G71830.1 CDX73996 AT3G09840.1 15592873
AT1G71830.1 CDY07941 AT3G09840.1 15592873
AT1G71830.1 CDY22207 AT3G09840.1 15592873
AT1G71830.1 CDY41316 AT3G09840.1 15592873
AT1G71830.1 CDY41581 AT3G09840.1 15592873
AT1G71830.1 CDY54618 AT3G09840.1 15592873
AT1G71830.1 CDX73996 AT3G09840.1 16473966
AT1G71830.1 CDY07941 AT3G09840.1 16473966
AT1G71830.1 CDY22207 AT3G09840.1 16473966
AT1G71830.1 CDY41316 AT3G09840.1 16473966
AT1G71830.1 CDY41581 AT3G09840.1 16473966
AT1G71830.1 CDY54618 AT3G09840.1 16473966
AT1G71830.1 CDX73996 AT3G09840.1 16621602
AT1G71830.1 CDY07941 AT3G09840.1 16621602
AT1G71830.1 CDY22207 AT3G09840.1 16621602
AT1G71830.1 CDY41316 AT3G09840.1 16621602
AT1G71830.1 CDY41581 AT3G09840.1 16621602
AT1G71830.1 CDY54618 AT3G09840.1 16621602
AT1G71830.1 CDX73996 AT3G09840.1 17693538
AT1G71830.1 CDY07941 AT3G09840.1 17693538
AT1G71830.1 CDY22207 AT3G09840.1 17693538
AT1G71830.1 CDY41316 AT3G09840.1 17693538
AT1G71830.1 CDY41581 AT3G09840.1 17693538
AT1G71830.1 CDY54618 AT3G09840.1 17693538
AT1G71830.1 CDX78272 AT3G54840.1 16621602
AT1G71830.1 CDY02896 AT3G54840.1 16621602
AT1G71830.1 CDY55834 AT3G54840.1 16621602
AT1G71830.1 CDY61658 AT3G54840.1 16621602
AT1G71830.1 CDX72702 AT4G39400.1 16473966
AT1G71830.1 CDX90332 AT4G39400.1 16473966
AT1G71830.1 CDY12143 AT4G39400.1 16473966
AT1G71830.1 CDY41977 AT4G39400.1 16473966
AT1G71830.1 CDY53185 AT4G39400.1 16473966
AT1G71830.1 CDY66903 AT4G39400.1 16473966
AT1G71830.1 CDY66904 AT4G39400.1 16473966
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96350 Canola plasma membrane 99.36 99.36
CDY36679 Canola plasma membrane 96.96 97.58
AT1G71830.1 Thale cress plasma membrane 96.32 96.32
Bra016112.1-P Field mustard plasma membrane 92.16 94.89
KRG91762 Soybean plasma membrane 88.48 88.62
KRH35013 Soybean plasma membrane 88.32 88.46
VIT_18s0164g00070.t01 Wine grape plasma membrane 87.84 87.98
KRH70218 Soybean endoplasmic reticulum 87.36 87.5
Solyc04g072570.2.1 Tomato extracellular 88.0 87.44
TraesCS6D01G186900.2 Wheat plasma membrane 81.76 84.6
TraesCS6A01G203600.2 Wheat cytosol 81.92 84.07
GSMUA_Achr7P17210_001 Banana cytosol 66.24 83.98
Os08t0174700-01 Rice plasma membrane 83.84 83.97
PGSC0003DMT400070819 Potato plasma membrane 84.8 83.6
TraesCS7D01G291200.3 Wheat plasma membrane 82.72 83.25
TraesCS7A01G293300.3 Wheat plasma membrane 82.56 82.96
TraesCS7B01G182300.1 Wheat plasma membrane 82.08 82.48
GSMUA_AchrUn_... Banana plasma membrane 83.04 82.38
Os04t0457800-01 Rice plasma membrane 82.56 82.17
TraesCS6B01G223700.3 Wheat plasma membrane 82.24 81.85
HORVU6Hr1G049080.7 Barley plasma membrane 82.24 81.85
GSMUA_Achr2P14850_001 Banana plastid 81.6 81.6
EES07030 Sorghum plasma membrane 81.6 81.47
Zm00001d016928_P010 Maize plasma membrane 81.6 81.47
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 81.6 81.34
TraesCS2B01G340700.1 Wheat plasma membrane 81.6 81.34
KXG24562 Sorghum plasma membrane 82.08 81.3
TraesCS2D01G321400.1 Wheat mitochondrion 81.28 81.02
Zm00001d024430_P002 Maize plasma membrane 82.56 80.88
GSMUA_Achr10P... Banana plasma membrane 80.8 80.67
Zm00001d050868_P004 Maize plasma membrane 80.32 80.58
Zm00001d025580_P001 Maize plasma membrane 80.16 80.55
EES12285 Sorghum plasma membrane 80.16 80.55
GSMUA_Achr7P11620_001 Banana plasma membrane 82.4 80.09
CDX68299 Canola plasma membrane 90.4 79.69
CDX68975 Canola plasma membrane 77.92 79.19
CDX75351 Canola plasma membrane 77.92 79.06
CDX72403 Canola plasma membrane 75.68 78.44
CDY46116 Canola plasma membrane 75.68 78.44
CDY45042 Canola plasma membrane 76.32 77.94
HORVU7Hr1G068990.2 Barley mitochondrion 82.88 76.85
Zm00001d049480_P005 Maize plasma membrane 78.56 74.51
CDY28301 Canola plasma membrane 46.08 72.54
CDX89615 Canola plasma membrane 70.56 72.3
CDX93126 Canola plasma membrane 70.56 72.3
HORVU2Hr1G080020.6 Barley cytosol 81.28 71.75
CDY48450 Canola plasma membrane 70.08 71.57
GSMUA_Achr10P... Banana mitochondrion 82.72 71.31
CDX71165 Canola plasma membrane 67.84 68.61
CDY39690 Canola cytosol 63.36 65.24
CDY28194 Canola cytosol 28.96 58.77
Os06t0225300-01 Rice plasma membrane 57.28 58.12
CDY61508 Canola cytosol 43.84 54.04
CDY44608 Canola cytosol 43.68 53.85
CDY40089 Canola plasma membrane 52.0 53.19
CDX85768 Canola plasma membrane 51.84 53.03
CDY08807 Canola plasma membrane 51.04 52.47
CDY55159 Canola extracellular, plasma membrane, vacuole 51.04 52.47
CDX69484 Canola plasma membrane 52.64 51.89
CDY26481 Canola plasma membrane 52.32 51.33
CDY48073 Canola plasma membrane 52.32 51.09
CDY61461 Canola golgi, plasma membrane 51.84 51.02
CDY46185 Canola golgi, plasma membrane 51.84 50.94
CDX83534 Canola plasma membrane 52.16 50.94
CDY41531 Canola cytosol 46.72 50.43
CDX84436 Canola cytosol 46.4 50.09
CDX72249 Canola plasma membrane 49.28 48.35
CDY39685 Canola plasma membrane 48.64 47.72
CDY65182 Canola plasma membrane 48.32 47.41
CDY00320 Canola endoplasmic reticulum 1.28 47.06
CDY39211 Canola plasma membrane 43.36 46.8
CDX77614 Canola plasma membrane 44.64 45.44
CDY39449 Canola plasma membrane 44.64 45.37
CDX70667 Canola endoplasmic reticulum, golgi 51.84 45.0
CDX78667 Canola golgi, plasma membrane 51.68 44.67
CDX68670 Canola plasma membrane 42.72 44.5
CDY52435 Canola plasma membrane, vacuole 20.16 35.9
CDX88452 Canola plasma membrane, vacuole 20.0 35.61
CDX84346 Canola plasma membrane 32.8 35.1
CDY00321 Canola plasma membrane 32.32 34.59
CDX84187 Canola plasma membrane 31.68 33.62
CDY31708 Canola plasma membrane 31.36 33.39
CDY16762 Canola plasma membrane 31.84 33.06
CDX87267 Canola plasma membrane 31.68 32.95
CDX79610 Canola plasma membrane 31.04 32.66
CDX84610 Canola plasma membrane 31.04 32.66
CDY32113 Canola plasma membrane 30.72 32.65
CDY40456 Canola plasma membrane 30.88 32.33
CDY67608 Canola cytosol, mitochondrion, nucleus 3.2 25.0
CDX68667 Canola cytosol, mitochondrion, nucleus 3.2 25.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078CCV3EnsemblPlants:CDX72833
ProteinID:CDX72833ProteinID:CDX72833.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005102GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00103228001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EC1DB9SEG:seg:
Description
BnaC06g32810D
Coordinates
chrLK031797:+:530329..534240
Molecular Weight (calculated)
69037.1 Da
IEP (calculated)
5.275
GRAVY (calculated)
-0.100
Length
625 amino acids
Sequence
(BLAST)
001: METIRLVFIL VSLILLPIQT FWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPDLG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFT GPIPESLGKL SKLRFLRLNN NTLTGSIPMS LTNITTLQVL DLSNNQLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIPPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPQDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQAPLDW
401: PTRKRIALGS ARGLCYLHDH CDPKIIHRDV KAANILLDED FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEQRELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAERWDEWQK GEILREEIDL
601: SPNPHSDWIV DSTYNLHAVE LSGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.