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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EER95525
EES03532
EES07030
EES09539
EES12285
EES14176
EES19530
KXG24562
KXG33866
KXG40206
OQU86764
OQU93218

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 EES09539 AT5G48380.1 19616764
AT1G34210.1 EES19530 AT5G48380.1 19616764
AT1G34210.1 KXG33866 AT5G48380.1 19616764
AT1G71830.1 EES07030 AT1G71830.1 11397085
AT1G71830.1 EES12285 AT1G71830.1 11397085
AT1G71830.1 KXG24562 AT1G71830.1 11397085
AT1G71830.1 EES07030 AT1G71830.1 16621602
AT1G71830.1 EES12285 AT1G71830.1 16621602
AT1G71830.1 KXG24562 AT1G71830.1 16621602
AT1G71830.1 EES14176 AT2G33500.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 15592873
AT1G71830.1 KXG40206 AT3G09840.1 15592873
AT1G71830.1 EER95525 AT3G09840.1 16473966
AT1G71830.1 KXG40206 AT3G09840.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 16621602
AT1G71830.1 KXG40206 AT3G09840.1 16621602
AT1G71830.1 EER95525 AT3G09840.1 17693538
AT1G71830.1 KXG40206 AT3G09840.1 17693538
AT1G71830.1 OQU93218 AT3G54840.1 16621602
AT1G71830.1 EES03532 AT4G39400.1 16473966
AT1G71830.1 OQU86764 AT4G39400.1 16473966
AT2G13790.1 EES03532 AT4G39400.1 17600708
AT2G13790.1 OQU86764 AT4G39400.1 17600708
AT2G13790.1 EES09539 AT5G48380.1 19616764
AT2G13790.1 EES19530 AT5G48380.1 19616764
AT2G13790.1 KXG33866 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025580_P001 Maize plasma membrane 97.75 97.75
Os04t0457800-01 Rice plasma membrane 88.91 88.06
TraesCS2D01G321400.1 Wheat mitochondrion 88.75 88.04
TraesCS2B01G340700.1 Wheat plasma membrane 88.42 87.72
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 88.26 87.56
EES07030 Sorghum plasma membrane 87.3 86.74
GSMUA_Achr7P17210_001 Banana cytosol 67.2 84.79
KXG24562 Sorghum plasma membrane 84.73 83.52
VIT_07s0031g01410.t01 Wine grape plasma membrane 83.6 83.33
VIT_18s0164g00070.t01 Wine grape plasma membrane 82.96 82.69
GSMUA_Achr2P14850_001 Banana plastid 82.96 82.56
KRG91762 Soybean plasma membrane 82.8 82.53
KRH35013 Soybean plasma membrane 82.8 82.53
KRH70218 Soybean endoplasmic reticulum 82.64 82.37
GSMUA_AchrUn_... Banana plasma membrane 82.96 81.9
Solyc04g072570.2.1 Tomato extracellular 82.8 81.88
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 68.01 81.66
Bra003911.1-P Field mustard plasma membrane 74.28 80.91
GSMUA_Achr7P11620_001 Banana plasma membrane 83.6 80.87
CDY36679 Canola plasma membrane 80.71 80.84
GSMUA_Achr10P... Banana plasma membrane 80.87 80.35
CDX96350 Canola plasma membrane 80.71 80.32
CDX72833 Canola plasma membrane 80.55 80.16
KRH10503 Soybean cytosol, plastid 60.29 80.13
AT1G71830.1 Thale cress plasma membrane 80.06 79.68
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.2 79.62
AT1G34210.1 Thale cress plasma membrane 80.39 79.62
Solyc01g104970.2.1 Tomato plasma membrane 78.3 79.06
Bra037006.1-P Field mustard mitochondrion 60.77 78.91
PGSC0003DMT400070819 Potato plasma membrane 79.9 78.39
HORVU2Hr1G080020.6 Barley cytosol 88.1 77.4
Solyc10g047140.1.1 Tomato plasma membrane 76.53 77.4
KRH43924 Soybean plasma membrane 76.21 76.95
VIT_12s0055g01160.t01 Wine grape plasma membrane 75.4 76.89
Bra016112.1-P Field mustard plasma membrane 74.92 76.77
CDX68975 Canola plasma membrane 75.56 76.42
CDX75351 Canola plasma membrane 75.56 76.3
CDY46116 Canola plasma membrane 73.95 76.29
CDX72403 Canola plasma membrane 73.95 76.29
Bra011439.1-P Field mustard plasma membrane 63.67 76.15
CDY45042 Canola plasma membrane 74.76 75.98
Bra034562.1-P Field mustard plasma membrane 68.97 75.8
VIT_12s0055g01280.t01 Wine grape plasma membrane 61.25 74.27
GSMUA_Achr10P... Banana mitochondrion 84.41 72.41
KRH58311 Soybean plasma membrane 71.7 71.82
AT4G33430.2 Thale cress plasma membrane 75.88 71.3
AT2G13790.1 Thale cress plasma membrane 71.06 71.29
Bra032128.1-P Field mustard cytosol 55.14 70.43
CDY28301 Canola plasma membrane 44.37 69.52
Bra041056.1-P Field mustard plasma membrane 57.23 68.86
CDX89615 Canola plasma membrane 67.52 68.85
CDX93126 Canola plasma membrane 67.36 68.69
CDY48450 Canola plasma membrane 67.52 68.63
AT2G13800.3 Thale cress plasma membrane 66.08 68.39
CDX68299 Canola plasma membrane 77.65 68.12
VIT_12s0055g01150.t01 Wine grape plasma membrane 65.11 66.61
CDX71165 Canola plasma membrane 65.59 66.02
Bra032125.1-P Field mustard plasma membrane 56.43 65.36
KRH42193 Soybean plasma membrane 63.99 64.61
CDY39690 Canola cytosol 62.54 64.09
KRH58312 Soybean plasma membrane 63.18 63.9
Bra013136.1-P Field mustard plasma membrane 54.18 58.3
OQU91137 Sorghum plasma membrane 42.77 55.88
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 25.4 53.2
EER88222 Sorghum plasma membrane 53.54 52.94
EES05592 Sorghum plasma membrane 51.45 51.12
EES02381 Sorghum golgi, plasma membrane, vacuole 51.93 50.95
EES04934 Sorghum plasma membrane 50.8 50.72
EES10085 Sorghum plasma membrane 47.11 47.33
EES06565 Sorghum plasma membrane 47.59 47.21
KXG25244 Sorghum plastid 49.84 42.06
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 42.44 41.84
EER95121 Sorghum plasma membrane 31.83 33.39
EES02154 Sorghum golgi, plasma membrane 19.29 32.97
EES17498 Sorghum plasma membrane 31.99 31.79
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8073419UniProt:C5Y9S6
EnsemblPlants:EES12285ProteinID:EES12285ProteinID:EES12285.1GO:GO:0000003GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007166
GO:GO:0007178GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607
GO:GO:0009719GO:GO:0009742GO:GO:0009790GO:GO:0009791GO:GO:0009987GO:GO:0010262
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
GO:GO:0038023GO:GO:0040007GO:GO:0040008GO:GO:0045089GO:GO:1900150InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220EnsemblPlantsGene:SORBI_3006G104500SUPFAM:SSF52058SUPFAM:SSF56112
unigene:Sbi.3020InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A872E9RefSeq:XP_002447957.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:-:47421172..47426397
Molecular Weight (calculated)
68597.1 Da
IEP (calculated)
5.733
GRAVY (calculated)
-0.240
Length
622 amino acids
Sequence
(BLAST)
001: MAASLRWWWS AVVLLVVVGV SPVVANTEGD ALYSLRQSLK DNNNVLQSWD PTLVNPCTWF HVTCNPDNSV IRLDLGNAQL SGPLVPQLGQ LKNMQYLELY
101: SNNISGPIPP ELGNLTNLVS LDLYLNNFTG GIPDTLGQLS KLRFLRLNNN SLSGQIPKTL TNINTLQVLD LSNNNLSGGV PSSGSFSLFT PISFANNPNL
201: CGPGTTKPCP GAPPFSPPPP YNPPSPASSK GVSSTGAIAG GVAAGTAFLI AVPAIGYALW RRRKPEEQFF DVPGEEDPEV HLGQLKRFSL RELQVATDNF
301: NNRNVLGRGG FGKVYKGRLS DGSLVAVKRL KEERTPGGEL QFQTEVELIS MAVHRNLLRL RGFCMTPTER LLVYPYMANG SVASRLRERT ENDPPLEWET
401: RARIALGSAR GLSYLHDHCD PKIIHRDVKA ANILLDEDFE AVVGDFGLAK LMDYKDTHVT TAVRGTIGHI APEYLSTGKS SEKTDVFGYG IMLLELITGQ
501: RAFDLARLAN DDDVMLLDWV KALLKEKKLE QLVDPDLQGR YADQEVESLI QVALLCTQGS PMERPKMSEV VRMLEGDGLA ERWEQWQKVE VMRQEAELAP
601: RHNDWIVDST YNLRAVELSG PR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.