Factsheet for Bra032125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001255.1-P
Bra006366.1-P
Bra010684.1-P
Bra011862.1-P
Bra033615.1-P
Bra040380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G13790.1	Bra010684.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra011862.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra033615.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra001255.1-P	AT5G48380.1	19616764
AT2G13790.1	Bra006366.1-P	AT5G48380.1	19616764
AT2G13790.1	Bra040380.1-P	AT5G48380.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032128.1-P	Field mustard	cytosol	84.92	93.63
CDY39690	Canola	cytosol	90.88	80.4
Bra041056.1-P	Field mustard	plasma membrane	66.11	68.67
AT2G13790.1	Thale cress	plasma membrane	75.42	65.32
Bra037006.1-P	Field mustard	mitochondrion	57.73	64.72
Bra034562.1-P	Field mustard	plasma membrane	67.78	64.31
AT2G13800.3	Thale cress	plasma membrane	71.88	64.23
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	61.83	64.09
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	62.2	63.62
Bra011439.1-P	Field mustard	plasma membrane	61.45	63.46
Solyc10g047140.1.1	Tomato	plasma membrane	70.2	61.3
VIT_12s0055g01280.t01	Wine grape	plasma membrane	58.47	61.21
Bra003911.1-P	Field mustard	plasma membrane	64.99	61.12
GSMUA_Achr7P17210_001	Banana	cytosol	55.87	60.85
Bra013136.1-P	Field mustard	plasma membrane	65.18	60.55
VIT_12s0055g01160.t01	Wine grape	plasma membrane	68.34	60.16
Solyc01g104970.2.1	Tomato	plasma membrane	68.9	60.06
KRH58311	Soybean	plasma membrane	67.97	58.78
Os08t0174700-01	Rice	plasma membrane	67.97	58.49
TraesCS6A01G203600.2	Wheat	cytosol	65.92	58.13
TraesCS6D01G186900.2	Wheat	plasma membrane	65.36	58.11
GSMUA_Achr10P...	Banana	plasma membrane	67.41	57.83
KXG24562	Sorghum	plasma membrane	67.78	57.69
EES07030	Sorghum	plasma membrane	67.23	57.67
TraesCS7D01G291200.3	Wheat	plasma membrane	66.67	57.65
Zm00001d016928_P010	Maize	plasma membrane	67.04	57.51
TraesCS7A01G293300.3	Wheat	plasma membrane	66.48	57.4
Os04t0457800-01	Rice	plasma membrane	67.04	57.32
TraesCS7B01G182300.1	Wheat	plasma membrane	66.11	57.07
Zm00001d050868_P004	Maize	plasma membrane	66.11	56.98
GSMUA_Achr2P14850_001	Banana	plastid	66.29	56.96
GSMUA_AchrUn_...	Banana	plasma membrane	66.67	56.83
Zm00001d024430_P002	Maize	plasma membrane	67.41	56.74
TraesCS2B01G340700.1	Wheat	plasma membrane	66.11	56.62
HORVU6Hr1G049080.7	Barley	plasma membrane	66.11	56.53
TraesCS6B01G223700.3	Wheat	plasma membrane	66.11	56.53
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	65.92	56.46
TraesCS2D01G321400.1	Wheat	mitochondrion	65.92	56.46
EES12285	Sorghum	plasma membrane	65.36	56.43
Zm00001d025580_P001	Maize	plasma membrane	64.99	56.11
GSMUA_Achr7P11620_001	Banana	plasma membrane	66.85	55.83
Bra016112.1-P	Field mustard	plasma membrane	62.2	55.02
Zm00001d049480_P005	Maize	plasma membrane	66.29	54.02
HORVU7Hr1G068990.2	Barley	mitochondrion	66.67	53.12
KRH42193	Soybean	plasma membrane	59.22	51.62
KRH58312	Soybean	plasma membrane	58.47	51.06
HORVU2Hr1G080020.6	Barley	cytosol	66.11	50.14
GSMUA_Achr10P...	Banana	mitochondrion	67.23	49.79
Bra025145.1-P	Field mustard	plasma membrane	48.6	48.6
Bra024369.1-P	Field mustard	plasma membrane	48.23	46.09
Bra028592.1-P	Field mustard	plasma membrane	51.96	45.66
Os06t0225300-01	Rice	plasma membrane	51.21	44.64
Bra008659.1-P	Field mustard	plasma membrane	51.4	43.53
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	43.76	43.2
Bra032133.1-P	Field mustard	plasma membrane	48.04	40.5
Bra038656.1-P	Field mustard	cytosol	43.58	40.41
Bra024069.1-P	Field mustard	plasma membrane	47.67	40.25
Bra006335.1-P	Field mustard	plasma membrane	50.47	39.91
Bra025056.1-P	Field mustard	plasma membrane	44.88	39.19
Bra011200.1-P	Field mustard	plastid	34.08	34.14
Bra035044.1-P	Field mustard	plasma membrane, vacuole	21.79	33.33
Bra005319.1-P	Field mustard	plasma membrane	27.75	30.41
Bra010115.1-P	Field mustard	plasma membrane	31.47	28.94
Bra035884.1-P	Field mustard	plasma membrane	32.03	28.57
Bra023017.1-P	Field mustard	plasma membrane	27.75	27.64
Bra017307.1-P	Field mustard	plasma membrane	29.61	27.04

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra032125	EnsemblPlants:Bra032125.1	EnsemblPlants:Bra032125.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005102
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M4ETJ4	PFAM:PF00069
PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF1
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:SERK	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025447D0	SEG:seg	:

Description

AT2G13800 (E=2e-159) ATSERK5, SERK5 | SERK5 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 5); ATP binding / protein kinase/ transmembrane receptor protein serine/threonine kinase

Coordinates

chrA04:-:10737082..10741121

Molecular Weight (calculated)

60083.8 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.104

Length

537 amino acids

Sequence
(BLAST)

001: MEQGRTPRSF ISIFLLFDLL LLRVAGNAEV DALTALRLSL SDPKNVLQSW TWNATDVTPC SWFHVTCNNE TTVVRVELFS NNITRGIPEE LGVLTELVSL
101: ELYMNNLSGS IPSSLGNLKK LIYLRLNNNA LSGELPRSLT DVLSLQVLFA NNNNLRLLPA PPSGKRTVTA IGIGAAVVIF SGGAIALAWW LRSRPHDSFF
201: DVIGEEDPEV HLGQLRRFSL RELLVATNDF SYKNLLGRGG FGKVYKGRLA DGSLVAVKRL KEERTKGVEL QFQTEVVMIS MAVRRNLLRL RGFCMTPTER
301: LLVYPYMANG SVASCLRERP RGNAALDWAK RKHIALGAAK GLAYLHDHCD QKIIHRDVKA ANILLDEQFE AVVGDFGLAK LMNYNDSHVT TDVRGTIGHI
401: APEYLSTGKS SVKTDVFGYG VMLLELITGQ KALDLARLAT DDDNMLLDWV KEVLKEEKLE SLVDAELEGN YVDKEVEELI EMVLLCTQSS SLKRPSMAEV
501: VRMLEGDGLA EKWEEWQKKE MLTRTKLYQT QEKTRLN

Best Arabidopsis Sequence Match ( AT2G13790.1 )
(BLAST)

001: MTSSKMEQRS LLCFLYLLLL FNFTLRVAGN AEGDALTQLK NSLSSGDPAN NVLQSWDATL VTPCTWFHVT CNPENKVTRV DLGNAKLSGK LVPELGQLLN
101: LQYLELYSNN ITGEIPEELG DLVELVSLDL YANSISGPIP SSLGKLGKLR FLRLNNNSLS GEIPMTLTSV QLQVLDISNN RLSGDIPVNG SFSLFTPISF
201: ANNSLTDLPE PPPTSTSPTP PPPSGGQMTA AIAGGVAAGA ALLFAVPAIA FAWWLRRKPQ DHFFDVPAEE DPEVHLGQLK RFTLRELLVA TDNFSNKNVL
301: GRGGFGKVYK GRLADGNLVA VKRLKEERTK GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPEGNPAL DWPKRKHIAL
401: GSARGLAYLH DHCDQKIIHR DVKAANILLD EEFEAVVGDF GLAKLMNYND SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
501: RLANDDDIML LDWVKEVLKE KKLESLVDAE LEGKYVETEV EQLIQMALLC TQSSAMERPK MSEVVRMLEG DGLAERWEEW QKEEMPIHDF NYQAYPHAGT
601: DWLIPYSNSL IENDYPSGPR

Arabidopsis Description

SERK4Somatic embryogenesis receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKG5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.