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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001255.1-P
Bra006366.1-P
Bra010684.1-P
Bra011862.1-P
Bra033615.1-P
Bra040380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G13790.1 Bra010684.1-P AT4G39400.1 17600708
AT2G13790.1 Bra011862.1-P AT4G39400.1 17600708
AT2G13790.1 Bra033615.1-P AT4G39400.1 17600708
AT2G13790.1 Bra001255.1-P AT5G48380.1 19616764
AT2G13790.1 Bra006366.1-P AT5G48380.1 19616764
AT2G13790.1 Bra040380.1-P AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93126 Canola plasma membrane 84.43 80.0
CDX89615 Canola plasma membrane 83.74 79.34
Bra041056.1-P Field mustard plasma membrane 68.17 76.21
Bra011439.1-P Field mustard plasma membrane 65.05 72.31
Bra037006.1-P Field mustard mitochondrion 57.79 69.73
Bra032128.1-P Field mustard cytosol 57.44 68.17
Bra034562.1-P Field mustard plasma membrane 64.71 66.08
Bra032125.1-P Field mustard plasma membrane 60.55 65.18
AT2G13790.1 Thale cress plasma membrane 69.9 65.16
GSMUA_Achr7P17210_001 Banana cytosol 55.02 64.5
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 56.92 62.67
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 55.88 62.36
AT2G13800.3 Thale cress plasma membrane 64.71 62.23
Bra003911.1-P Field mustard plasma membrane 61.42 62.17
Solyc10g047140.1.1 Tomato plasma membrane 63.49 59.67
Solyc01g104970.2.1 Tomato plasma membrane 62.63 58.77
VIT_12s0055g01160.t01 Wine grape plasma membrane 60.38 57.21
KRH58311 Soybean plasma membrane 60.55 56.36
GSMUA_Achr10P... Banana plasma membrane 60.9 56.23
TraesCS6D01G186900.2 Wheat plasma membrane 58.13 55.63
Os08t0174700-01 Rice plasma membrane 59.86 55.45
TraesCS6A01G203600.2 Wheat cytosol 58.3 55.34
GSMUA_AchrUn_... Banana plasma membrane 60.03 55.08
TraesCS7D01G291200.3 Wheat plasma membrane 59.17 55.07
TraesCS7A01G293300.3 Wheat plasma membrane 59.17 54.98
VIT_12s0055g01280.t01 Wine grape plasma membrane 48.79 54.97
EES07030 Sorghum plasma membrane 59.34 54.79
Zm00001d050868_P004 Maize plasma membrane 59.0 54.74
GSMUA_Achr2P14850_001 Banana plastid 59.17 54.72
TraesCS7B01G182300.1 Wheat plasma membrane 58.82 54.66
Zm00001d016928_P010 Maize plasma membrane 59.17 54.63
Os04t0457800-01 Rice plasma membrane 59.34 54.62
HORVU6Hr1G049080.7 Barley plasma membrane 59.17 54.46
KXG24562 Sorghum plasma membrane 59.34 54.36
TraesCS6B01G223700.3 Wheat plasma membrane 59.0 54.3
EES12285 Sorghum plasma membrane 58.3 54.18
Zm00001d025580_P001 Maize plasma membrane 58.13 54.02
TraesCS2D01G321400.1 Wheat mitochondrion 58.48 53.91
TraesCS2B01G340700.1 Wheat plasma membrane 58.48 53.91
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 58.48 53.91
Bra016112.1-P Field mustard plasma membrane 56.57 53.87
GSMUA_Achr7P11620_001 Banana plasma membrane 59.86 53.81
Zm00001d024430_P002 Maize plasma membrane 59.0 53.45
HORVU7Hr1G068990.2 Barley mitochondrion 60.03 51.48
Zm00001d049480_P005 Maize plasma membrane 58.3 51.14
KRH42193 Soybean plasma membrane 52.94 49.68
KRH58312 Soybean plasma membrane 51.73 48.62
GSMUA_Achr10P... Banana mitochondrion 60.55 48.28
HORVU2Hr1G080020.6 Barley cytosol 58.3 47.6
Bra031479.1-P Field mustard endoplasmic reticulum, plasma membrane 43.6 46.32
Bra025145.1-P Field mustard plasma membrane 42.73 46.0
Bra024369.1-P Field mustard plasma membrane 44.46 45.73
Bra028592.1-P Field mustard plasma membrane 44.46 42.06
Os06t0225300-01 Rice plasma membrane 44.46 41.72
Bra008659.1-P Field mustard plasma membrane 43.6 39.75
Bra038656.1-P Field mustard cytosol 39.62 39.55
Bra032133.1-P Field mustard plasma membrane 41.0 37.21
Bra006335.1-P Field mustard plasma membrane 43.43 36.97
Bra024069.1-P Field mustard plasma membrane 40.66 36.95
Bra025056.1-P Field mustard plasma membrane 39.1 36.75
Bra035044.1-P Field mustard plasma membrane, vacuole 20.59 33.9
Bra011200.1-P Field mustard plastid 28.72 30.97
Bra005319.1-P Field mustard plasma membrane 24.05 28.37
Bra023017.1-P Field mustard plasma membrane 25.61 27.46
Bra010115.1-P Field mustard plasma membrane 26.12 25.86
Bra035884.1-P Field mustard plasma membrane 26.82 25.75
Bra017307.1-P Field mustard plasma membrane 24.74 24.32
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EnsemblPlantsGene:Bra013136EnsemblPlants:Bra013136.1
EnsemblPlants:Bra013136.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005102GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfUniProt:M4D9H6
PFAM:PF00069PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00025409F7SEG:seg::
Description
AT2G13790 (E=2e-182) ATSERK4, SERK4, BKK1 | SERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4); protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase
Coordinates
chrA03:-:20265487..20269512
Molecular Weight (calculated)
64759.5 Da
IEP (calculated)
6.016
GRAVY (calculated)
-0.185
Length
578 amino acids
Sequence
(BLAST)
001: MPLSRWEKGA RTASSFSQAH VFVSGGGAFI GLRLGVCNCD GLLDSFLCFL TALVSSEWWF ESNVCVEKFT HKALRIFAFT LTSSKKKMEW PRSFIWLILL
101: SDLLLRAVGN SEGEALTAFK DSLSDPTNAL QSWDNQNSVS PCTWFHVTCN PENRVVRVFA NNNLRQPPPS PPPPISTPPP SPPVSRSRMT AAVAGGVAAG
201: AAVLFAFPAI AFVWWIRSRS QDRFFDVPAE ENPEVHFGQL RRFSLRELLV ATDNFSHKNV LGRGGFGKVY KGRLADGSLV AVKRLKEERT QGGELQFQTE
301: VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERLEGNPA LDWPKRKHIA LGAARGLAYL HDQCEQKIIH RDVKAANILL DEEFEAVVGD
401: FGLAKLMNYN DSHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGVMLLE LITGQKAFDL ARLANDDDVM LLDWVKEVLK EKRFESLVDA ELEGKYEEKE
501: VEQLIQMALL CTQISSLERP KMSEVVRMLE GEGLAEKWEE WQNEEILTND SNYLQVGTEW FIPISNSLIE NDYPSGPR
Best Arabidopsis Sequence Match ( AT2G13800.2 )
(BLAST)
001: MELVSLDLFA NNISGPIPSS LGKLGKLRFL RLYNNSLSGE IPRSLTALPL DVLDISNNRL SGDIPVNGSF SQFTSMSFAN NKLRPRPASP SPSPSGTSAA
101: IVVGVAAGAA LLFALAWWLR RKLQGHFLDV PAEEDPEVYL GQFKRFSLRE LLVATEKFSK RNVLGKGRFG ILYKGRLADD TLVAVKRLNE ERTKGGELQF
201: QTEVEMISMA VHRNLLRLRG FCMTPTERLL VYPYMANGSV ASCLRERPEG NPALDWPKRK HIALGSARGL AYLHDHCDQK IIHLDVKAAN ILLDEEFEAV
301: VGDFGLAKLM NYNDSHVTTA VRGTIGHIAP EYLSTGKSSE KTDVFGYGVM LLELITGQKA FDLARLANDD DIMLLDWVKE VLKEKKLESL VDAELEGKYV
401: ETEVEQLIQM ALLCTQSSAM ERPKMSEVVR MLEGDGLAER WEEWQKEEMP IHDFNYQAYP HAGTDWLIPY SNSLIENDYP SGPR
Arabidopsis Description
SERK5Somatic embryogenesis receptor kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.