Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G321400.1 | Wheat | mitochondrion | 99.04 | 99.04 |
TraesCS2A01G343100.1 | Wheat | mitochondrion, plasma membrane | 98.41 | 98.41 |
Os04t0457800-01 | Rice | plasma membrane | 91.55 | 91.4 |
TraesCS6B01G223700.3 | Wheat | plasma membrane | 89.31 | 89.17 |
Zm00001d025580_P001 | Maize | plasma membrane | 88.2 | 88.91 |
EES12285 | Sorghum | plasma membrane | 87.72 | 88.42 |
GSMUA_Achr7P17210_001 | Banana | cytosol | 67.94 | 86.41 |
TraesCS7B01G182300.1 | Wheat | plasma membrane | 85.49 | 86.17 |
HORVU2Hr1G080020.6 | Barley | cytosol | 96.17 | 85.17 |
GSMUA_Achr2P14850_001 | Banana | plastid | 84.37 | 84.64 |
VIT_07s0031g01410.t01 | Wine grape | plasma membrane | 84.21 | 84.62 |
KRG91762 | Soybean | plasma membrane | 83.73 | 84.13 |
KRH35013 | Soybean | plasma membrane | 83.73 | 84.13 |
VIT_18s0164g00070.t01 | Wine grape | plasma membrane | 83.41 | 83.81 |
KRH70218 | Soybean | endoplasmic reticulum | 83.09 | 83.49 |
GSMUA_AchrUn_... | Banana | plasma membrane | 83.89 | 83.49 |
Solyc04g072570.2.1 | Tomato | extracellular | 83.41 | 83.15 |
Bra003911.1-P | Field mustard | plasma membrane | 75.28 | 82.66 |
CDY36679 | Canola | plasma membrane | 81.82 | 82.61 |
GSMUA_Achr10P... | Banana | plasma membrane | 82.3 | 82.43 |
PGSC0003DMT400032797 | Potato | cytosol, plasma membrane, plastid | 67.94 | 82.24 |
GSMUA_Achr7P11620_001 | Banana | plasma membrane | 84.21 | 82.12 |
AT1G34210.1 | Thale cress | plasma membrane | 81.98 | 81.85 |
CDX96350 | Canola | plasma membrane | 81.5 | 81.76 |
AT1G71830.1 | Thale cress | plasma membrane | 81.34 | 81.6 |
CDX72833 | Canola | plasma membrane | 81.34 | 81.6 |
Bra037006.1-P | Field mustard | mitochondrion | 61.88 | 81.0 |
KRH10503 | Soybean | cytosol, plastid | 60.13 | 80.56 |
PGSC0003DMT400045607 | Potato | cytosol, plasma membrane, plastid | 66.99 | 80.0 |
Solyc01g104970.2.1 | Tomato | plasma membrane | 77.83 | 79.22 |
PGSC0003DMT400070819 | Potato | plasma membrane | 80.06 | 79.18 |
CDY46116 | Canola | plasma membrane | 75.12 | 78.11 |
CDX72403 | Canola | plasma membrane | 75.12 | 78.11 |
Bra016112.1-P | Field mustard | plasma membrane | 75.6 | 78.09 |
VIT_12s0055g01160.t01 | Wine grape | plasma membrane | 75.76 | 77.87 |
CDY45042 | Canola | plasma membrane | 75.92 | 77.78 |
Bra034562.1-P | Field mustard | plasma membrane | 70.18 | 77.74 |
Solyc10g047140.1.1 | Tomato | plasma membrane | 76.24 | 77.72 |
Bra011439.1-P | Field mustard | plasma membrane | 64.43 | 77.69 |
CDX68975 | Canola | plasma membrane | 76.08 | 77.56 |
CDX75351 | Canola | plasma membrane | 76.08 | 77.44 |
KRH43924 | Soybean | plasma membrane | 75.6 | 76.95 |
VIT_12s0055g01280.t01 | Wine grape | plasma membrane | 61.08 | 74.66 |
GSMUA_Achr10P... | Banana | mitochondrion | 86.12 | 74.48 |
AT4G33430.2 | Thale cress | plasma membrane | 76.87 | 72.81 |
AT2G13790.1 | Thale cress | plasma membrane | 71.93 | 72.74 |
CDY28301 | Canola | plasma membrane | 45.93 | 72.54 |
KRH58311 | Soybean | plasma membrane | 70.97 | 71.66 |
Bra032128.1-P | Field mustard | cytosol | 54.7 | 70.43 |
CDX68299 | Canola | plasma membrane | 78.63 | 69.53 |
AT2G13800.3 | Thale cress | plasma membrane | 66.35 | 69.22 |
CDX89615 | Canola | plasma membrane | 67.3 | 69.18 |
CDX93126 | Canola | plasma membrane | 67.15 | 69.02 |
CDY48450 | Canola | plasma membrane | 67.3 | 68.95 |
Bra041056.1-P | Field mustard | plasma membrane | 56.78 | 68.86 |
VIT_12s0055g01150.t01 | Wine grape | plasma membrane | 65.23 | 67.27 |
CDX71165 | Canola | plasma membrane | 65.23 | 66.18 |
Bra032125.1-P | Field mustard | plasma membrane | 56.62 | 66.11 |
KRH42193 | Soybean | plasma membrane | 64.27 | 65.42 |
CDY39690 | Canola | cytosol | 62.68 | 64.74 |
KRH58312 | Soybean | plasma membrane | 63.16 | 64.39 |
Bra013136.1-P | Field mustard | plasma membrane | 53.91 | 58.48 |
TraesCS3B01G334400.2 | Wheat | plasma membrane | 50.4 | 52.32 |
VIT_12s0121g00310.t01 | Wine grape | cytosol, mitochondrion | 24.72 | 52.19 |
TraesCS6B01G319700.1 | Wheat | plasma membrane | 51.36 | 51.52 |
TraesCS7B01G118100.1 | Wheat | plasma membrane | 51.2 | 51.36 |
TraesCS3B01G106100.1 | Wheat | plasma membrane | 51.2 | 50.79 |
TraesCS7B01G324500.1 | Wheat | plasma membrane | 49.12 | 47.68 |
TraesCS7B01G036100.2 | Wheat | plasma membrane | 45.61 | 46.96 |
TraesCS6B01G184300.1 | Wheat | plasma membrane | 46.09 | 46.17 |
TraesCS1B01G134800.1 | Wheat | plasma membrane | 40.99 | 41.79 |
TraesCS3B01G199100.1 | Wheat | golgi, plasma membrane | 19.3 | 34.77 |
TraesCS4B01G211800.1 | Wheat | plasma membrane | 31.58 | 33.62 |
TraesCS5B01G004300.1 | Wheat | plasma membrane | 31.74 | 32.31 |
Protein Annotations
Description
No Description!
Coordinates
chr2B:-:486191262..486196723
Molecular Weight (calculated)
69020.9 Da
IEP (calculated)
6.053
GRAVY (calculated)
-0.186
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPEMLRR RWWAAVAVLS VVLAVSRVAA NTEGDALYSL RQSLKDANNV LQSWDPTLVN PCTWFHVTCN TDNSVIRVDL GNAQLSGALV SQLGQLKNLQ
101: YLELYSNNIS GTIPLELGNL TNLVSLDLYL NKFTGGIPDT LGQLLKLRFL RLNNNSLSGQ IPQSLTNIST LQVLDLSNNN LSGAVPSTGS FSLFTPISFG
201: NNPNLCGPGT SKPCPGAPPF SPPPPFNPPT PPTTPGDPKT GAIAGGVAAG AALIFAVPAI GFALWRRRKP EEHFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ASDNFSNKNI LGRGGFGKVY KGRLTDGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASR LRERGPNEPA
401: LEWEKRTRIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEDFEAVVGD FGLAKLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKVEMLVDP DLQSVYVEHE VEALIQVALL CTQGSPMDRP KMSEVVRMLE GDGLAERWEE WQKVEVVRQE
601: AELAPRNNDW IVDSTYNLRA VELSGPR
101: YLELYSNNIS GTIPLELGNL TNLVSLDLYL NKFTGGIPDT LGQLLKLRFL RLNNNSLSGQ IPQSLTNIST LQVLDLSNNN LSGAVPSTGS FSLFTPISFG
201: NNPNLCGPGT SKPCPGAPPF SPPPPFNPPT PPTTPGDPKT GAIAGGVAAG AALIFAVPAI GFALWRRRKP EEHFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ASDNFSNKNI LGRGGFGKVY KGRLTDGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASR LRERGPNEPA
401: LEWEKRTRIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEDFEAVVGD FGLAKLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKVEMLVDP DLQSVYVEHE VEALIQVALL CTQGSPMDRP KMSEVVRMLE GDGLAERWEE WQKVEVVRQE
601: AELAPRNNDW IVDSTYNLRA VELSGPR
001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
Arabidopsis Description
SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.