Factsheet for TraesCS6B01G319700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G269400.1	Wheat	plasma membrane	99.2	99.04
TraesCS6A01G289500.1	Wheat	plasma membrane	98.72	98.88
HORVU6Hr1G072620.29	Barley	plasma membrane	96.96	87.83
EES05592	Sorghum	plasma membrane	85.92	85.78
Zm00001d017913_P001	Maize	plasma membrane	85.76	85.35
TraesCS7B01G118100.1	Wheat	plasma membrane	81.92	81.92
Os02t0728500-01	Rice	extracellular, plasma membrane	40.16	77.47
VIT_14s0083g00620.t01	Wine grape	plasma membrane	74.4	74.76
KRH45170	Soybean	plasma membrane	73.92	74.16
KRH01456	Soybean	plasma membrane	73.92	74.16
VIT_01s0010g01000.t01	Wine grape	plasma membrane	73.44	73.44
GSMUA_Achr3P28140_001	Banana	plasma membrane	72.0	73.17
Solyc02g089550.2.1	Tomato	plasma membrane	72.32	72.2
KRG93765	Soybean	plasma membrane	71.84	71.96
KRH75229	Soybean	plasma membrane	70.56	71.01
AT5G16000.1	Thale cress	plasma membrane	72.48	71.0
KRH18305	Soybean	plasma membrane	70.88	70.99
PGSC0003DMT400007454	Potato	plasma membrane	70.24	70.81
KRH71075	Soybean	plasma membrane	70.24	70.69
CDX69484	Canola	plasma membrane	71.52	70.5
Bra008659.1-P	Field mustard	plasma membrane	71.52	70.5
CDY26481	Canola	plasma membrane	71.52	70.17
Solyc04g005910.2.1	Tomato	plasma membrane	69.44	70.0
PGSC0003DMT400019446	Potato	plasma membrane	69.44	69.89
Solyc05g010400.2.1	Tomato	plasma membrane	69.12	69.57
GSMUA_Achr9P19160_001	Banana	plasma membrane	68.32	68.54
GSMUA_Achr9P14620_001	Banana	plasma membrane	76.32	68.05
PGSC0003DMT400026062	Potato	plasma membrane	72.0	67.77
Bra025145.1-P	Field mustard	plasma membrane	57.92	67.41
CDX83534	Canola	plasma membrane	67.52	65.94
CDY48073	Canola	plasma membrane	67.36	65.78
GSMUA_Achr3P06260_001	Banana	plasma membrane	72.0	65.5
GSMUA_Achr1P16110_001	Banana	plasma membrane	70.4	65.38
AT3G25560.3	Thale cress	plasma membrane	67.2	64.92
GSMUA_Achr1P09620_001	Banana	plasma membrane	72.8	64.91
GSMUA_Achr7P06010_001	Banana	plasma membrane	71.68	61.96
TraesCS3B01G106100.1	Wheat	plasma membrane	62.4	61.71
CDX78667	Canola	golgi, plasma membrane	69.12	59.75
CDX70667	Canola	endoplasmic reticulum, golgi	68.8	59.72
Bra006335.1-P	Field mustard	plasma membrane	63.84	58.76
TraesCS7B01G324500.1	Wheat	plasma membrane	60.48	58.51
TraesCS7B01G182300.1	Wheat	plasma membrane	51.68	51.93
TraesCS6B01G184300.1	Wheat	plasma membrane	51.84	51.76
TraesCS6B01G223700.3	Wheat	plasma membrane	52.0	51.75
TraesCS2B01G340700.1	Wheat	plasma membrane	51.52	51.36
TraesCS3B01G334400.2	Wheat	plasma membrane	46.88	48.51
TraesCS7B01G036100.2	Wheat	plasma membrane	44.16	45.32
TraesCS1B01G134800.1	Wheat	plasma membrane	42.4	43.09
TraesCS5B01G004300.1	Wheat	plasma membrane	33.44	33.93
TraesCS3B01G199100.1	Wheat	golgi, plasma membrane	18.72	33.62
TraesCS4B01G211800.1	Wheat	plasma membrane	31.2	33.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G319700	EnsemblPlants:TraesCS6B01G319700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:567408028..567411299

Molecular Weight (calculated)

68693.0 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.098

Length

625 amino acids

Sequence
(BLAST)

001: MEAVPLLLLL LLLLSSPLAP APANGLLSPK GVNYEVQALM TIKNYLKDPH GVLKNWDQDS VDPCSWTMVT CSQENLVTGL EAPSQNLSGL LSPSIGNLTN
101: LEIVLLQNNN INGRIPAEIG RLTKLRTLDL SSNHFSGEIP GSVSRLRDLQ YLRLNNNTLS GAFPSASANL SHLVFLDLSY NNLSCPVPGS LARTFNIVGN
201: PLICGAATEQ DCYGTLPMPM SYSLNNTQGT VLPAKSKSHK AAIAFGSTIG CISILFPVTG LLFWWRHRKN RQILFDVDDQ HIENVNLENL KRFQFRELQA
301: ATENFSSKNM IGKGGFGNVY RGKLPDGTIV AVKRLKDGNA AGGELQFQTE VEMISLAVHR NLLRLCGFCM TATERLLIYP YMSNGSVASR LKGKPPLNWI
401: TRKGIALGAA RGLLYLHEQC DPKIIHRDVK AANVLLDDFC EAIVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QTALEFGKSS NQKGAMLDWV KKMHQEKKLD VLVDKGLGSS YDHIELEEMV QVALLCTQYL PSHRPKMSEV VRMLEGDGLA ERWEASQRTD SHKFKVPDFT
601: FGRCYSDLTD DSSLLVQAVE LSGPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.