Factsheet for VIT_14s0083g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45170	Soybean	plasma membrane	83.76	83.63
KRH01456	Soybean	plasma membrane	82.96	82.83
VIT_01s0010g01000.t01	Wine grape	plasma membrane	81.99	81.6
KRG93765	Soybean	plasma membrane	81.35	81.09
KRH18305	Soybean	plasma membrane	80.87	80.61
Solyc02g089550.2.1	Tomato	plasma membrane	80.71	80.19
AT5G16000.1	Thale cress	plasma membrane	79.9	77.9
Bra008659.1-P	Field mustard	plasma membrane	78.94	77.44
CDX69484	Canola	plasma membrane	78.94	77.44
CDY26481	Canola	plasma membrane	78.78	76.92
GSMUA_Achr3P28140_001	Banana	plasma membrane	75.08	75.94
PGSC0003DMT400026062	Potato	plasma membrane	81.03	75.9
TraesCS6A01G289500.1	Wheat	plasma membrane	75.08	74.84
TraesCS6D01G269400.1	Wheat	plasma membrane	75.24	74.76
EES05592	Sorghum	plasma membrane	75.08	74.6
TraesCS6B01G319700.1	Wheat	plasma membrane	74.76	74.4
EER88222	Sorghum	plasma membrane	74.6	73.77
Zm00001d017913_P001	Maize	plasma membrane	74.44	73.73
TraesCS7A01G211100.1	Wheat	plasma membrane	72.51	72.16
HORVU7Hr1G043030.2	Barley	plasma membrane	72.51	72.16
TraesCS7B01G118100.1	Wheat	plasma membrane	72.51	72.16
TraesCS7D01G212800.1	Wheat	plasma membrane	72.51	72.16
GSMUA_Achr9P19160_001	Banana	plasma membrane	72.03	71.91
Zm00001d018347_P001	Maize	cytosol	9.0	70.0
Zm00001d037297_P002	Maize	plasma membrane	73.63	69.6
GSMUA_Achr9P14620_001	Banana	plasma membrane	78.3	69.47
GSMUA_Achr1P16110_001	Banana	plasma membrane	74.28	68.65
Os06t0274500-01	Rice	extracellular	70.42	68.44
GSMUA_Achr3P06260_001	Banana	plasma membrane	75.08	67.98
GSMUA_Achr1P09620_001	Banana	plasma membrane	76.53	67.9
HORVU6Hr1G072620.29	Barley	plasma membrane	74.76	67.39
CDX70667	Canola	endoplasmic reticulum, golgi	76.85	66.39
VIT_01s0127g00230.t01	Wine grape	plasma membrane	66.56	66.13
CDX78667	Canola	golgi, plasma membrane	76.85	66.11
GSMUA_Achr7P06010_001	Banana	plasma membrane	76.85	66.11
VIT_11s0037g00960.t01	Wine grape	plasma membrane	66.88	65.0
Bra006335.1-P	Field mustard	plasma membrane	70.74	64.8
VIT_00s0646g00030.t01	Wine grape	cytosol	35.05	62.46
Zm00001d045728_P003	Maize	plasma membrane	72.99	62.36
VIT_00s0634g00030.t01	Wine grape	cytosol	23.31	61.7
VIT_00s0641g00010.t01	Wine grape	cytosol	35.37	60.61
Os02t0728500-01	Rice	extracellular, plasma membrane	31.35	60.19
VIT_10s0003g01490.t01	Wine grape	plasma membrane	56.91	58.61
VIT_18s0164g00070.t01	Wine grape	plasma membrane	54.5	54.33
VIT_07s0031g01410.t01	Wine grape	plasma membrane	53.7	53.53
VIT_12s0055g01280.t01	Wine grape	plasma membrane	43.25	52.44
VIT_12s0055g01160.t01	Wine grape	plasma membrane	51.29	52.3
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	17.2	51.44
VIT_12s0055g01150.t01	Wine grape	plasma membrane	47.43	48.52
VIT_07s0031g02910.t01	Wine grape	cytosol	43.09	46.77
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	18.65	39.06
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	20.42	36.08
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	19.94	35.03
VIT_02s0087g00170.t01	Wine grape	plasma membrane	32.32	33.72
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	1.93	33.33
VIT_17s0000g05570.t01	Wine grape	plasma membrane	32.15	33.22

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100253129	wikigene:100253129	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CBI16897	ProteinID:CBI16897.3	UniProt:D7SMJ9	EMBL:FN594955	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0034504	GO:GO:0038023	GO:GO:0040007
GO:GO:0040015	GO:GO:0046777	GO:GO:0051607	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100253129	wikigene:LOC100253129	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001BE11B2	ArrayExpress:VIT_14s0083g00620
EnsemblPlantsGene:VIT_14s0083g00620	EnsemblPlants:VIT_14s0083g00620.t01	unigene:Vvi.18231	RefSeq:XP_002278965	RefSeq:XP_002278965.1	SEG:seg

Description

No Description!

Coordinates

chr14:+:22672469..22675655

Molecular Weight (calculated)

68996.2 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.108

Length

622 amino acids

Sequence
(BLAST)

001: MRSRVIAFWF VPFLWFWTSA NGLLSPKGVN FEVQALMGIK AFLVDPHGVL DNWDGDAVDP CSWTMVTCST DSLVVGLGTP SQNLSGTLSP SIGNLTNLQI
101: VLLQNNNITG PIPQELGRLS KLHTLDLSNN FFTDEVPSSL GHLTSLQYLR LNNNSLSGPF PVSLANMTQL AFLDLSFNNL SGPVPRFPAK TFNIVGNPLI
201: CATGSEQECY GTTLMPMSMT LNSSQTALPT RRSKNHKLAL AFGTSLGCIC LLIFGGGLLL WWRQRHNQQM FFDVNDRHHE EVSLGNLKRF QFRELQIATD
301: NFSSKNILGK GGFGNVYKGY LQDGTIVAVK RLKDGNAVGG EIQFQTEVEM ISLAVHRNLL RLYGFCITTS ERLLVYPYMS NGSVASRLKG KPVLDWGTRK
401: RIALGAARGL LYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL LLELITGQRA
501: LEFGKAANQK GAMLDWVKKI HQEKRLEILV DKDLKHFYDR VELEEMVQVA LLCTQYLPGH RPKMSEVVQM LEGDGLAERW EASQRGEVTK CKPHELSSSE
601: RYSDLTDDSS LLVQAMELSG PR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.