Factsheet for VIT_00s0848g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
nucleus 2
mitochondrion 1
plasma membrane 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0634g00030.t01	Wine grape	cytosol	62.98	55.74
VIT_00s0641g00010.t01	Wine grape	cytosol	70.67	40.5
VIT_00s0646g00030.t01	Wine grape	cytosol	67.31	40.11
OQU91137	Sorghum	plasma membrane	66.83	29.2
Bra024369.1-P	Field mustard	plasma membrane	67.31	24.91
KRH59316	Soybean	plasma membrane	72.6	24.75
KRH43169	Soybean	plasma membrane	72.12	24.59
GSMUA_Achr8P23480_001	Banana	plasma membrane	70.67	24.38
PGSC0003DMT400056093	Potato	plasma membrane	70.19	24.17
Solyc03g078520.2.1	Tomato	plasma membrane	70.19	24.05
Solyc11g008960.1.1	Tomato	plasma membrane	69.71	24.01
PGSC0003DMT400041690	Potato	plasma membrane	69.23	23.84
Os02t0283800-01	Rice	plasma membrane	69.23	23.72
TraesCS3B01G334400.2	Wheat	plasma membrane	68.75	23.68
TraesCS3D01G299800.1	Wheat	plasma membrane	68.75	23.64
CDX85768	Canola	plasma membrane	69.23	23.57
CDY40089	Canola	plasma membrane	69.23	23.57
Bra028592.1-P	Field mustard	plasma membrane	69.23	23.57
AT5G10290.1	Thale cress	plasma membrane	69.23	23.49
CDY55159	Canola	extracellular, plasma membrane, vacuole	67.31	23.03
Zm00001d015971_P004	Maize	plasma membrane	68.27	22.98
CDY08807	Canola	plasma membrane	66.83	22.86
EES04934	Sorghum	plasma membrane	68.27	22.79
KRG97568	Soybean	plasma membrane	66.35	22.77
VIT_07s0031g02910.t01	Wine grape	cytosol	62.5	22.69
AT5G65240.2	Thale cress	plasma membrane	67.31	21.88
KRH31305	Soybean	plasma membrane	66.35	21.8
TraesCS3A01G302200.1	Wheat	plastid	67.79	21.69
VIT_12s0055g01280.t01	Wine grape	plasma membrane	53.37	21.64
Zm00001d033652_P002	Maize	plasma membrane	68.75	20.97
HORVU3Hr1G073960.5	Barley	plastid	69.23	19.75
VIT_18s0164g00070.t01	Wine grape	plasma membrane	57.21	19.07
VIT_07s0031g01410.t01	Wine grape	plasma membrane	56.73	18.91
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	26.92	18.86
VIT_12s0055g01160.t01	Wine grape	plasma membrane	54.81	18.69
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	31.73	18.64
GSMUA_Achr2P22230_001	Banana	plasma membrane	64.42	18.51
VIT_01s0127g00230.t01	Wine grape	plasma membrane	54.33	18.05
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	30.29	17.9
VIT_12s0055g01150.t01	Wine grape	plasma membrane	51.92	17.76
VIT_14s0083g00620.t01	Wine grape	plasma membrane	51.44	17.2
VIT_01s0010g01000.t01	Wine grape	plasma membrane	51.44	17.12
VIT_10s0003g01490.t01	Wine grape	plasma membrane	48.56	16.72
VIT_11s0037g00960.t01	Wine grape	plasma membrane	47.6	15.47
VIT_17s0000g05570.t01	Wine grape	plasma membrane	33.17	11.46
VIT_02s0087g00170.t01	Wine grape	plasma membrane	31.73	11.07
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:CCB48478	ProteinID:CCB48478.1	UniProt:F6H8D5	EMBL:FN595348
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0002107EC9	ArrayExpress:VIT_00s0848g00010	EnsemblPlantsGene:VIT_00s0848g00010	EnsemblPlants:VIT_00s0848g00010.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:36081711..36082788

Molecular Weight (calculated)

22911.5 Da

IEP (calculated)

5.942

GRAVY (calculated)

-0.057

Length

208 amino acids

Sequence
(BLAST)

001: MSCPSPHSVG KLWGYGFCSL FLASLGSSFF SKSVANGLIW EFCEQGEKKG SENNSSKGCK TQFNLLRIPL FVTFITEVKP GEPVLDWPTR KRVALGTARG
101: LEYLHEHCNP KIIHRDVKAA NVLLDEDFEA VVGDFGLAKL VDVRITSVTT QVRGTMGHIA PEYLSTGKSS ERTDVFGYGI MLLELVTGQP AVDFSRLEGE
201: DDILLLDH

Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)

001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR

Arabidopsis Description

SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.