Factsheet for VIT_10s0003g01490.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g072310.2.1	Tomato	plasma membrane	60.1	77.07
KRH21243	Soybean	plasma membrane	78.15	75.64
KRH11043	Soybean	plasma membrane	70.86	75.35
PGSC0003DMT400073093	Potato	plasma membrane	75.99	73.44
AT5G45780.1	Thale cress	plasma membrane	73.34	72.15
Bra025056.1-P	Field mustard	plasma membrane	72.85	71.54
CDX77614	Canola	plasma membrane	72.68	71.5
CDY39449	Canola	plasma membrane	72.52	71.22
Zm00001d037840_P001	Maize	cytosol	41.06	67.39
GSMUA_Achr6P00440_001	Banana	plasma membrane	66.39	66.83
Zm00001d036887_P001	Maize	plasma membrane	29.3	64.6
Os02t0236100-01	Rice	plasma membrane	66.06	64.35
TraesCS6D01G146100.1	Wheat	plasma membrane	65.89	63.58
TraesCS6A01G156100.1	Wheat	plasma membrane	65.73	63.42
TraesCS6B01G184300.1	Wheat	plasma membrane	65.56	63.26
Zm00001d016197_P001	Maize	vacuole	65.07	62.88
EES06565	Sorghum	plasma membrane	64.74	62.36
VIT_14s0083g00620.t01	Wine grape	plasma membrane	58.61	56.91
VIT_00s0646g00030.t01	Wine grape	cytosol	32.78	56.73
VIT_01s0127g00230.t01	Wine grape	plasma membrane	58.61	56.55
VIT_01s0010g01000.t01	Wine grape	plasma membrane	57.45	55.52
VIT_00s0634g00030.t01	Wine grape	cytosol	21.19	54.47
VIT_00s0641g00010.t01	Wine grape	cytosol	32.62	54.27
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	16.72	48.56
VIT_11s0037g00960.t01	Wine grape	plasma membrane	51.32	48.44
VIT_12s0055g01280.t01	Wine grape	plasma membrane	40.07	47.17
VIT_07s0031g01410.t01	Wine grape	plasma membrane	48.34	46.79
VIT_18s0164g00070.t01	Wine grape	plasma membrane	48.18	46.63
VIT_07s0031g02910.t01	Wine grape	cytosol	43.87	46.25
VIT_12s0055g01160.t01	Wine grape	plasma membrane	45.53	45.08
VIT_12s0055g01150.t01	Wine grape	plasma membrane	44.04	43.75
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	20.53	35.23
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	20.2	34.46
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	16.72	34.01
VIT_17s0000g05570.t01	Wine grape	plasma membrane	33.28	33.39
VIT_02s0087g00170.t01	Wine grape	plasma membrane	32.78	33.22
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	1.66	27.78

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100854996	wikigene:100854996	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CBI30706	ProteinID:CBI30706.3	UniProt:D7TJN4	EMBL:FN595992	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100854996	wikigene:LOC100854996	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF12799	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27001	PANTHER:PTHR27001:SF104	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001BE37F5	ArrayExpress:VIT_10s0003g01490	EnsemblPlantsGene:VIT_10s0003g01490	EnsemblPlants:VIT_10s0003g01490.t01	unigene:Vvi.25303	RefSeq:XP_003633015
RefSeq:XP_003633015.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:2894734..2902673

Molecular Weight (calculated)

66272.7 Da

IEP (calculated)

6.741

GRAVY (calculated)

-0.106

Length

604 amino acids

Sequence
(BLAST)

001: MGGASISLLS PKGVNYEVAA LMAMKNKMND ESNVLDGWDI NSVDPCTWNM VGCTPEGFVI SLSMSSVGLS GTLSPSIGNL SHLRSLWLQN NQLSGPIPVE
101: IGKLSALQTL DLSDNQFIGE IPSSLGLLTH LNYLRLSRNK LSGQIPGLVA NLTGLSFLDL SFNNLSGPTP NILAKDYSIT GNNFLCTSSS AQTCMRVAKP
201: INGTSSSEKV SGHHRWVVSV AIGVSCTFLV SMTLLVCLVH WCRSRLLFTS YVQQDYEFDI GHLKRFSFRE LQIATSNFSP KNILGQGGFG VVYKGYLPNR
301: TIVAVKRLKD PNFTGEVQFQ TEVEMIGLAL HRNLLRLYGF CMTSDERLLV YPYMPNGSVA DRLRDTGREK PSLDWNRRMH IALGAARGLL YLHEQCNPKI
401: IHRDVKAANI LLDENFESVV GDFGLAKLLD RRDSHVTTAV RGTVGHIAPE YLSTGQSSEK TDVFGFGILL LELITGPKAL DARNGQVQKG MILDWVRTLQ
501: EEKRLEVLID RDLKGCFDTE ELEKAVGLAQ LCTQPHPNLR PKMSEVLKVL ESMVGQSGHA EEESQGGGGT LNGEGRACSL SRNYSEANEE SSFIIEAIEL
601: SGPR

Best Arabidopsis Sequence Match ( AT5G45780.1 )
(BLAST)

001: MEISLMKFLF LGIWVYYYSV LDSVSAMDSL LSPKGVNYEV AALMSVKNKM KDEKEVLSGW DINSVDPCTW NMVGCSSEGF VVSLEMASKG LSGILSTSIG
101: ELTHLHTLLL QNNQLTGPIP SELGQLSELE TLDLSGNRFS GEIPASLGFL THLNYLRLSR NLLSGQVPHL VAGLSGLSFL DLSFNNLSGP TPNISAKDYR
201: IVGNAFLCGP ASQELCSDAT PVRNATGLSE KDNSKHHSLV LSFAFGIVVA FIISLMFLFF WVLWHRSRLS RSHVQQDYEF EIGHLKRFSF REIQTATSNF
301: SPKNILGQGG FGMVYKGYLP NGTVVAVKRL KDPIYTGEVQ FQTEVEMIGL AVHRNLLRLF GFCMTPEERM LVYPYMPNGS VADRLRDNYG EKPSLDWNRR
401: ISIALGAARG LVYLHEQCNP KIIHRDVKAA NILLDESFEA IVGDFGLAKL LDQRDSHVTT AVRGTIGHIA PEYLSTGQSS EKTDVFGFGV LILELITGHK
501: MIDQGNGQVR KGMILSWVRT LKAEKRFAEM VDRDLKGEFD DLVLEEVVEL ALLCTQPHPN LRPRMSQVLK VLEGLVEQCE GGYEARAPSV SRNYSNGHEE
601: QSFIIEAIEL SGPR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Source:UniProtKB/Swiss-Prot;Acc:C0LGU5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.