Factsheet for VIT_00s0646g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0634g00030.t01	Wine grape	cytosol	64.18	95.32
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	9.74	94.44
VIT_00s0641g00010.t01	Wine grape	cytosol	93.98	90.36
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	40.11	67.31
OQU91137	Sorghum	plasma membrane	84.81	62.18
KRH59316	Soybean	plasma membrane	96.28	55.08
KRH43169	Soybean	plasma membrane	95.7	54.75
Solyc11g008960.1.1	Tomato	plasma membrane	93.7	54.14
PGSC0003DMT400041690	Potato	plasma membrane	93.41	53.97
Bra024369.1-P	Field mustard	plasma membrane	86.82	53.91
GSMUA_Achr8P23480_001	Banana	plasma membrane	91.4	52.9
PGSC0003DMT400056093	Potato	plasma membrane	90.83	52.48
Solyc03g078520.2.1	Tomato	plasma membrane	91.12	52.39
AT5G10290.1	Thale cress	plasma membrane	90.54	51.55
CDY40089	Canola	plasma membrane	89.97	51.39
Bra028592.1-P	Field mustard	plasma membrane	89.97	51.39
CDX85768	Canola	plasma membrane	89.97	51.39
Os02t0283800-01	Rice	plasma membrane	89.11	51.24
TraesCS3B01G334400.2	Wheat	plasma membrane	87.97	50.83
TraesCS3D01G299800.1	Wheat	plasma membrane	87.97	50.74
KRG97568	Soybean	plasma membrane	87.11	50.16
CDY55159	Canola	extracellular, plasma membrane, vacuole	87.11	50.0
CDY08807	Canola	plasma membrane	87.11	50.0
Zm00001d015971_P004	Maize	plasma membrane	87.68	49.51
EES04934	Sorghum	plasma membrane	86.82	48.64
KRH31305	Soybean	plasma membrane	87.39	48.18
TraesCS3A01G302200.1	Wheat	plastid	87.97	47.23
AT5G65240.2	Thale cress	plasma membrane	86.53	47.19
Zm00001d033652_P002	Maize	plasma membrane	88.83	45.45
VIT_07s0031g02910.t01	Wine grape	cytosol	73.35	44.68
HORVU3Hr1G073960.5	Barley	plastid	87.97	42.11
VIT_18s0164g00070.t01	Wine grape	plasma membrane	69.34	38.78
VIT_07s0031g01410.t01	Wine grape	plasma membrane	69.05	38.62
GSMUA_Achr2P22230_001	Banana	plasma membrane	76.22	36.74
VIT_12s0055g01160.t01	Wine grape	plasma membrane	64.18	36.72
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	30.95	36.36
VIT_01s0010g01000.t01	Wine grape	plasma membrane	63.04	35.2
VIT_14s0083g00620.t01	Wine grape	plasma membrane	62.46	35.05
VIT_01s0127g00230.t01	Wine grape	plasma membrane	62.75	34.98
VIT_12s0055g01150.t01	Wine grape	plasma membrane	59.6	34.21
VIT_12s0055g01280.t01	Wine grape	plasma membrane	49.28	33.53
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	33.52	33.24
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.52	33.05
VIT_10s0003g01490.t01	Wine grape	plasma membrane	56.73	32.78
VIT_11s0037g00960.t01	Wine grape	plasma membrane	59.89	32.66
VIT_17s0000g05570.t01	Wine grape	plasma membrane	34.96	20.27
VIT_02s0087g00170.t01	Wine grape	plasma membrane	32.66	19.13

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100267381	wikigene:100267381	MapMan:18.4.1.2	Gene3D:3.30.200.20	ProteinID:CCB50164
ProteinID:CCB50164.1	UniProt:F6HD69	EMBL:FN595552	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100267381	wikigene:LOC100267381	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC63958
UniParc:UPI000210A6FF	ArrayExpress:VIT_00s0646g00030	EnsemblPlantsGene:VIT_00s0646g00030	EnsemblPlants:VIT_00s0646g00030.t01	unigene:Vvi.4952	RefSeq:XP_002268913
RefSeq:XP_002268913.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:33514021..33519118

Molecular Weight (calculated)

40089.9 Da

IEP (calculated)

5.535

GRAVY (calculated)

-0.457

Length

349 amino acids

Sequence
(BLAST)

001: EVDRRIAFGQ LRRFAWRELQ VATENFSEKN VLGQGGFGKV YKGVLGDNTK VAVKRLTDYE SPGGDAAFQR EVEMISVAVH RNLLRLIGFC TTPTERLLVY
101: PFMQNLSVAY RLREVKPGEP VLDWPTRKRV ALGTARGLEY LHEHCNPKII HRDVKAANVL LDEDFEAVVG DFGLAKLVDV RKTNVTTQVR GTMGHIAPEY
201: LSTGKSSERT DVFGYGIMLL ELVTGQRAID FSRLEEEDDV LLLDHVKKLE REKRLDAIVD RNLNRNYDIQ EVEMMIQVAL LCTQPSPEDR PAMSEVVRML
301: EGEGLAERWE EWQHVEVSRR QEYERLQRRF DWGEDSLYHQ DAIELSGGR

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.