Factsheet for VIT_07s0031g02910.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0646g00030.t01	Wine grape	cytosol	44.68	73.35
KRH59648	Soybean	golgi, plasma membrane	74.35	71.48
Solyc05g056370.2.1	Tomato	vacuole	76.61	71.27
PGSC0003DMT400059959	Potato	plasma membrane	76.09	70.78
Bra038656.1-P	Field mustard	cytosol	71.38	70.64
CDX84436	Canola	cytosol	71.38	70.64
CDY41531	Canola	cytosol	71.38	70.64
KRH40995	Soybean	plasma membrane	74.69	69.59
VIT_00s0634g00030.t01	Wine grape	cytosol	28.27	68.94
VIT_00s0641g00010.t01	Wine grape	cytosol	42.58	67.22
AT5G63710.3	Thale cress	plasma membrane	71.38	66.5
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	22.69	62.5
VIT_18s0164g00070.t01	Wine grape	plasma membrane	49.56	45.51
VIT_07s0031g01410.t01	Wine grape	plasma membrane	49.04	45.03
VIT_12s0055g01280.t01	Wine grape	plasma membrane	39.44	44.05
VIT_10s0003g01490.t01	Wine grape	plasma membrane	46.25	43.87
VIT_12s0055g01160.t01	Wine grape	plasma membrane	46.25	43.44
VIT_01s0010g01000.t01	Wine grape	plasma membrane	47.29	43.36
VIT_14s0083g00620.t01	Wine grape	plasma membrane	46.77	43.09
VIT_01s0127g00230.t01	Wine grape	plasma membrane	46.77	42.81
VIT_12s0055g01150.t01	Wine grape	plasma membrane	44.15	41.61
VIT_11s0037g00960.t01	Wine grape	plasma membrane	45.2	40.47
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	19.02	36.7
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	20.42	33.05
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	20.24	32.95
VIT_02s0087g00170.t01	Wine grape	plasma membrane	32.64	31.38
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	1.92	30.56
VIT_17s0000g05570.t01	Wine grape	plasma membrane	31.59	30.07

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250696	wikigene:100250696	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB47173	ProteinID:CCB47173.1	UniProt:F6H4G9	EMBL:FN595233	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250696	wikigene:LOC100250696	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF114	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00015C9F78	ArrayExpress:VIT_07s0031g02910	EnsemblPlantsGene:VIT_07s0031g02910
EnsemblPlants:VIT_07s0031g02910.t01	RefSeq:XP_002272767	RefSeq:XP_002272767.2	RefSeq:XP_010652971.1	RefSeq:XP_010652972.1	RefSeq:XP_019076394.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:19598669..19612384

Molecular Weight (calculated)

64172.5 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.243

Length

573 amino acids

Sequence
(BLAST)

001: MLRFSYSSNG PDVEGEALVD FLKTLNDSNN RITDWNDHFV SPCFSWSNVT CRNGNVISLS LASKGFSGTL SPSITKLKFL ASLDLKDNNL SGALPDYLSS
101: MINLQNLDLA RNNFSGSIPS SWGQLSNIKH LDLSSNDLTG RIPEQLFSVP TFNFTGNRLT CGSSLQQPCA SGSTIPVSTK KSKLRVVTPV AICAAFILLS
201: LGAIFAYRYC YAHKIKRDVF HDVTGEDECK ISFGQVRRFS WHELQLATDE FSESNIIGQG GFGKVYRGVL PNGTKVAVKR LSDYHNPGGE AAFQREVQLI
301: SVAVHKNLLR LIGFCTTFNE RILVYPFMQN LSVAYRLRDL KPGERGLDWP TRRKVAFGAA HGLEYLHEHC NPKIIHRDLK AANILLDDDF EPVLGDFGLA
401: KLLDTKLTHV TTQVRGTMGH IAPEYLSTGK SSEKTDVFGY GITLLELVTG QRAIDFSRLE EEEDVLLLDH IRKLQREKRL DAIVDRNLKT FDAKEVETIV
501: QVALLCTQSS PEDRPKMAEV VSMLQGEGLA ARWVEWERLE EVRNQHFSLL SHQFPWADES THDQEAIQLS KAR

Best Arabidopsis Sequence Match ( AT5G63710.4 )
(BLAST)

001: MALAFVGITS STTQPDIEGG ALLQLRDSLN DSSNRLKWTR DFVSPCYSWS YVTCRGQSVV ALNLASSGFT GTLSPAITKL KFLVTLELQN NSLSGALPDS
101: LGNMVNLQTL NLSVNSFSGS IPASWSQLSN LKHLDLSSNN LTGSIPTQFF SIPTFDFSGT QLICGKSLNQ PCSSSSRLPV TSSKKKLRDI TLTASCVASI
201: ILFLGAMVMY HHHRVRRTKY DIFFDVAGED DRKISFGQLK RFSLREIQLA TDSFNESNLI GQGGFGKVYR GLLPDKTKVA VKRLADYFSP GGEAAFQREI
301: QLISVAVHKN LLRLIGFCTT SSERILVYPY MENLSVAYRL RDLKAGEEGL DWPTRKRVAF GSAHGLEYLH EHCNPKIIHR DLKAANILLD NNFEPVLGDF
401: GLAKLVDTSL THVTTQVRGT MGHIAPEYLC TGKSSEKTDV FGYGITLLEL VTGQRAIDFS RLEEEENILL LDHIKKLLRE QRLRDIVDSN LTTYDSKEVE
501: TIVQVALLCT QGSPEDRPAM SEVVKMLQGT GGLAEKWTEW EQLEEVRNKE ALLLPTLPAT WDEEETTVDQ ESIRLSTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G63710]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.