Factsheet for VIT_19s0014g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
plasma membrane 6
extracellular 4
endoplasmic reticulum 5
vacuole 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	76.55	76.99
Solyc07g062040.2.1	Tomato	plastid	66.95	75.48
KRH13485	Soybean	golgi, plasma membrane	73.45	73.65
GSMUA_Achr10P...	Banana	golgi, vacuole	72.6	73.22
PGSC0003DMT400018244	Potato	plasma membrane	72.32	72.93
Bra035044.1-P	Field mustard	plasma membrane, vacuole	69.77	70.37
CDY52435	Canola	plasma membrane, vacuole	69.77	70.37
CDX88452	Canola	plasma membrane, vacuole	69.49	70.09
AT1G78530.1	Thale cress	plasma membrane, vacuole	69.49	69.3
Os01t0247500-01	Rice	golgi, plasma membrane	66.38	67.14
HORVU3Hr1G033790.1	Barley	golgi, plasma membrane	65.25	66.38
TraesCS3A01G167100.1	Wheat	golgi, plasma membrane	64.97	66.09
TraesCS3B01G199100.1	Wheat	golgi, plasma membrane	64.97	66.09
TraesCS3D01G173200.1	Wheat	golgi, plasma membrane	64.97	66.09
EES02154	Sorghum	golgi, plasma membrane	64.97	63.19
Zm00001d039243_P001	Maize	golgi, plasma membrane	62.43	58.62
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	68.36	56.67
VIT_00s0634g00030.t01	Wine grape	cytosol	22.88	34.47
VIT_00s0646g00030.t01	Wine grape	cytosol	33.05	33.52
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	18.64	31.73
VIT_00s0641g00010.t01	Wine grape	cytosol	32.49	31.68
VIT_02s0087g00170.t01	Wine grape	plasma membrane	45.2	26.85
VIT_17s0000g05570.t01	Wine grape	plasma membrane	43.22	25.42
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	19.21	22.9
VIT_07s0031g02910.t01	Wine grape	cytosol	33.05	20.42
VIT_12s0055g01150.t01	Wine grape	plasma membrane	35.03	20.39
VIT_12s0055g01160.t01	Wine grape	plasma membrane	35.03	20.33
VIT_10s0003g01490.t01	Wine grape	plasma membrane	34.46	20.2
VIT_12s0055g01280.t01	Wine grape	plasma membrane	29.1	20.08
VIT_01s0010g01000.t01	Wine grape	plasma membrane	35.31	20.0
VIT_14s0083g00620.t01	Wine grape	plasma membrane	35.03	19.94
VIT_18s0164g00070.t01	Wine grape	plasma membrane	35.03	19.87
VIT_07s0031g01410.t01	Wine grape	plasma membrane	34.46	19.55
VIT_11s0037g00960.t01	Wine grape	plasma membrane	35.03	19.38
VIT_01s0127g00230.t01	Wine grape	plasma membrane	33.05	18.69
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	0.28	2.78

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257246	wikigene:100257246	MapMan:18.4.1.13.1	Gene3D:3.30.200.20	ProteinID:CBI20089
ProteinID:CBI20089.3	UniProt:E0CRZ0	EMBL:FN595229	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257246
wikigene:LOC100257246	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44831	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI00015C7B62	ArrayExpress:VIT_19s0014g00110	EnsemblPlantsGene:VIT_19s0014g00110	EnsemblPlants:VIT_19s0014g00110.t01	unigene:Vvi.19947
RefSeq:XP_002285658	RefSeq:XP_002285658.2	RefSeq:XP_010644052.1	RefSeq:XP_010644053.1	:	:

Description

No Description!

Coordinates

chr19:-:85758..88311

Molecular Weight (calculated)

39664.2 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.112

Length

354 amino acids

Sequence
(BLAST)

001: MGNARIIVLY ITVCCIAFVT SKVIISVLLY KRWKRKHSIY KDSFSGGKMV MFTSPMMQSL NSDALLKKAT RLSNKDVIGS GGHGTVYRLT VDGSVAFAVK
101: RLNRGSADQD RGFERELEAM GDIKHRNIVT LHGYYTAPHY NLLIYELMPN GSLDAYLHGR LKEKKLLDWP SRYKIAVGAA RGIAYLHHDC IPHIIHRDIK
201: SSNILLDQNM EARVSDFGLA TLMEPDKTHV STFVAGTFGY LAPEYFDTGR ATAKGDVYSF GVVLLELLTG KRPSDEAFIE EGTRLVTWVK AVVLEKKEEH
301: VLDSSLECCS LDEVNNVFSI ATMCLESEPS KRPTMAEVLK MLEQIKSDKL VKES

Best Arabidopsis Sequence Match ( AT1G78530.1 )
(BLAST)

001: MANAKETTFY ITISVVAFVI GKIVIALLFY KRWKRKHTIH ENGFPVKGGG KMVMFRSQLL NSVSSDMFMK KTHKLSNKDI LGSGGFGTVY RLVIDDSTTF
101: AVKRLNRGTS ERDRGFHREL EAMADIKHRN IVTLHGYFTS PHYNLLIYEL MPNGSLDSFL HGRKALDWAS RYRIAVGAAR GISYLHHDCI PHIIHRDIKS
201: SNILLDHNME ARVSDFGLAT LMEPDKTHVS TFVAGTFGYL APEYFDTGKA TMKGDVYSFG VVLLELLTGR KPTDDEFFEE GTKLVTWVKG VVRDQREEVV
301: IDNRLRGSSV QENEEMNDVF GIAMMCLEPE PAIRPAMTEV VKLLEYIKLS TRSSF

Arabidopsis Description

Receptor-like serine/threonine-protein kinase At1g78530 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM9]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.