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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • cytosol 1
  • plasma membrane 5
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • golgi 3
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:cytosol
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52435 Canola plasma membrane, vacuole 98.58 98.58
CDX88452 Canola plasma membrane, vacuole 96.87 96.87
AT1G78530.1 Thale cress plasma membrane, vacuole 90.6 89.58
Solyc07g062040.2.1 Tomato plastid 63.25 70.7
VIT_19s0014g00110.t01 Wine grape endoplasmic reticulum, plasma membrane 70.37 69.77
KRH13485 Soybean golgi, plasma membrane 69.52 69.12
PGSC0003DMT400018244 Potato plasma membrane 68.66 68.66
GSMUA_Achr10P... Banana golgi, vacuole 68.38 68.38
Os01t0247500-01 Rice golgi, plasma membrane 61.82 62.0
HORVU3Hr1G033790.1 Barley golgi, plasma membrane 60.4 60.92
TraesCS3A01G167100.1 Wheat golgi, plasma membrane 60.11 60.63
TraesCS3B01G199100.1 Wheat golgi, plasma membrane 60.11 60.63
TraesCS3D01G173200.1 Wheat golgi, plasma membrane 60.11 60.63
EES02154 Sorghum golgi, plasma membrane 60.4 58.24
GSMUA_Achr5P16740_001 Banana golgi, mitochondrion, plasma membrane, plastid 65.53 53.86
Zm00001d039243_P001 Maize golgi, plasma membrane 57.55 53.58
Bra005319.1-P Field mustard plasma membrane 41.03 29.39
Bra023017.1-P Field mustard plasma membrane 43.02 28.01
Bra037006.1-P Field mustard mitochondrion 35.61 26.1
Bra017307.1-P Field mustard plasma membrane 43.02 25.68
Bra010115.1-P Field mustard plasma membrane 42.17 25.34
Bra035884.1-P Field mustard plasma membrane 41.88 24.42
Bra041056.1-P Field mustard plasma membrane 35.33 23.98
Bra011439.1-P Field mustard plasma membrane 35.33 23.85
Bra025145.1-P Field mustard plasma membrane 35.61 23.28
Bra032128.1-P Field mustard cytosol 32.19 23.2
Bra031479.1-P Field mustard endoplasmic reticulum, plasma membrane 34.47 22.24
Bra003911.1-P Field mustard plasma membrane 35.9 22.07
Bra034562.1-P Field mustard plasma membrane 35.33 21.91
Bra032125.1-P Field mustard plasma membrane 33.33 21.79
Bra024369.1-P Field mustard plasma membrane 33.9 21.17
Bra013136.1-P Field mustard plasma membrane 33.9 20.59
Bra011200.1-P Field mustard plastid 31.34 20.52
Bra016112.1-P Field mustard plasma membrane 35.33 20.43
Bra038656.1-P Field mustard cytosol 33.62 20.38
Bra032133.1-P Field mustard plasma membrane 36.47 20.09
Bra028592.1-P Field mustard plasma membrane 34.76 19.97
Bra008659.1-P Field mustard plasma membrane 35.9 19.87
Bra024069.1-P Field mustard plasma membrane 35.9 19.81
Bra025056.1-P Field mustard plasma membrane 33.9 19.35
Bra006335.1-P Field mustard plasma membrane 35.61 18.41
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.13.1Gene3D:3.30.200.20EnsemblPlantsGene:Bra035044EnsemblPlants:Bra035044.1EnsemblPlants:Bra035044.1-P
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M4F1U7PFAM:PF07714PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44831InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0002541C01:
Description
AT1G78530 (E=1e-184) | protein kinase family protein
Coordinates
chrA07:-:21932676..21934088
Molecular Weight (calculated)
39478.9 Da
IEP (calculated)
8.592
GRAVY (calculated)
-0.170
Length
351 amino acids
Sequence
(BLAST)
001: MANAKETTLY ITISVVAFVT GKIIIALLLY KRWKRKHTVH ENGFPVKGGG KMVMFRSPLL NSVSSDLFMK KTHKLSNKDI LGSGGFGTVY RLTINESTAF
101: AVKRLNRGDS ERDGGFHREL ESMADIKHRN IVTLHGYYTS PHFNLLIYEL MPNGSLDSFL HGKKSGDGKV LDWAARYKIA VGAARGISYL HHDCIPHIIH
201: RDIKSSNILL DHNMETRVSD FGLATLMEPD KTHVSTFVAG TFGYLAPEYF DTGKATMKGD VYSFGVLLLE LLTGRRPTDD EFFEEGTKLV TWVKGVVRDQ
301: REEVVIDNRL RGSPVQEMND VFGIAMMCLE PEPDVRPTMT EVVKLLEYIS L
Best Arabidopsis Sequence Match ( AT1G78530.1 )
(BLAST)
001: MANAKETTFY ITISVVAFVI GKIVIALLFY KRWKRKHTIH ENGFPVKGGG KMVMFRSQLL NSVSSDMFMK KTHKLSNKDI LGSGGFGTVY RLVIDDSTTF
101: AVKRLNRGTS ERDRGFHREL EAMADIKHRN IVTLHGYFTS PHYNLLIYEL MPNGSLDSFL HGRKALDWAS RYRIAVGAAR GISYLHHDCI PHIIHRDIKS
201: SNILLDHNME ARVSDFGLAT LMEPDKTHVS TFVAGTFGYL APEYFDTGKA TMKGDVYSFG VVLLELLTGR KPTDDEFFEE GTKLVTWVKG VVRDQREEVV
301: IDNRLRGSSV QENEEMNDVF GIAMMCLEPE PAIRPAMTEV VKLLEYIKLS TRSSF
Arabidopsis Description
Receptor-like serine/threonine-protein kinase At1g78530 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM9]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.