Factsheet for Bra016112.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001297.1-P
Bra003911.1-P
Bra007104.1-P
Bra010684.1-P
Bra011862.1-P
Bra014785.1-P
Bra016112.1-P
Bra029795.1-P
Bra033615.1-P
Bra034089.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G71830.1	Bra003911.1-P	AT1G71830.1	11397085
AT1G71830.1	Bra016112.1-P	AT1G71830.1	11397085
AT1G71830.1	Bra003911.1-P	AT1G71830.1	16621602
AT1G71830.1	Bra016112.1-P	AT1G71830.1	16621602
AT1G71830.1	Bra001297.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra029795.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra034089.1-P	AT3G09840.1	15592873
AT1G71830.1	Bra001297.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra029795.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra034089.1-P	AT3G09840.1	16473966
AT1G71830.1	Bra001297.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra029795.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra034089.1-P	AT3G09840.1	16621602
AT1G71830.1	Bra001297.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra029795.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra034089.1-P	AT3G09840.1	17693538
AT1G71830.1	Bra007104.1-P	AT3G54840.1	16621602
AT1G71830.1	Bra014785.1-P	AT3G54840.1	16621602
AT1G71830.1	Bra010684.1-P	AT4G39400.1	16473966
AT1G71830.1	Bra011862.1-P	AT4G39400.1	16473966
AT1G71830.1	Bra033615.1-P	AT4G39400.1	16473966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96350	Canola	plasma membrane	95.55	92.8
CDX72833	Canola	plasma membrane	94.89	92.16
Bra003911.1-P	Field mustard	plasma membrane	84.35	89.67
AT1G71830.1	Thale cress	plasma membrane	91.93	89.28
GSMUA_Achr7P17210_001	Banana	cytosol	67.71	83.37
KRG91762	Soybean	plasma membrane	84.51	82.21
KRH35013	Soybean	plasma membrane	84.35	82.05
VIT_18s0164g00070.t01	Wine grape	plasma membrane	84.18	81.89
KRH70218	Soybean	endoplasmic reticulum	83.53	81.25
Bra037006.1-P	Field mustard	mitochondrion	63.92	81.0
Solyc04g072570.2.1	Tomato	extracellular	83.86	80.92
TraesCS6D01G186900.2	Wheat	plasma membrane	78.09	78.48
TraesCS6A01G203600.2	Wheat	cytosol	78.42	78.16
Os08t0174700-01	Rice	plasma membrane	79.74	77.56
TraesCS7D01G291200.3	Wheat	plasma membrane	78.91	77.13
PGSC0003DMT400070819	Potato	plasma membrane	80.56	77.13
TraesCS7A01G293300.3	Wheat	plasma membrane	78.75	76.85
TraesCS7B01G182300.1	Wheat	plasma membrane	78.58	76.69
GSMUA_AchrUn_...	Banana	plasma membrane	79.57	76.67
Os04t0457800-01	Rice	plasma membrane	79.08	76.43
HORVU6Hr1G049080.7	Barley	plasma membrane	78.75	76.11
TraesCS6B01G223700.3	Wheat	plasma membrane	78.75	76.11
Zm00001d016928_P010	Maize	plasma membrane	78.09	75.72
EES07030	Sorghum	plasma membrane	78.09	75.72
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	78.09	75.6
TraesCS2B01G340700.1	Wheat	plasma membrane	78.09	75.6
GSMUA_Achr2P14850_001	Banana	plastid	77.76	75.52
KXG24562	Sorghum	plasma membrane	78.42	75.44
GSMUA_Achr10P...	Banana	plasma membrane	77.76	75.4
TraesCS2D01G321400.1	Wheat	mitochondrion	77.76	75.28
Zm00001d050868_P004	Maize	plasma membrane	77.1	75.12
EES12285	Sorghum	plasma membrane	76.77	74.92
Zm00001d025580_P001	Maize	plasma membrane	76.77	74.92
Zm00001d024430_P002	Maize	plasma membrane	78.58	74.76
GSMUA_Achr7P11620_001	Banana	plasma membrane	78.75	74.34
Bra011439.1-P	Field mustard	plasma membrane	62.27	72.69
Bra034562.1-P	Field mustard	plasma membrane	67.71	72.61
HORVU7Hr1G068990.2	Barley	mitochondrion	79.08	71.22
Zm00001d049480_P005	Maize	plasma membrane	74.63	68.74
HORVU2Hr1G080020.6	Barley	cytosol	77.76	66.67
GSMUA_Achr10P...	Banana	mitochondrion	79.08	66.21
Bra041056.1-P	Field mustard	plasma membrane	55.52	65.18
Bra032128.1-P	Field mustard	cytosol	51.89	64.68
Bra032125.1-P	Field mustard	plasma membrane	55.02	62.2
Bra013136.1-P	Field mustard	plasma membrane	53.87	56.57
Os06t0225300-01	Rice	plasma membrane	55.52	54.71
Bra024369.1-P	Field mustard	plasma membrane	47.61	51.42
Bra025145.1-P	Field mustard	plasma membrane	44.65	50.47
Bra028592.1-P	Field mustard	plasma membrane	50.25	49.92
Bra008659.1-P	Field mustard	plasma membrane	50.91	48.74
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	43.0	47.98
Bra038656.1-P	Field mustard	cytosol	44.98	47.15
Bra024069.1-P	Field mustard	plasma membrane	48.43	46.23
Bra032133.1-P	Field mustard	plasma membrane	47.12	44.9
Bra025056.1-P	Field mustard	plasma membrane	43.49	42.93
Bra006335.1-P	Field mustard	plasma membrane	46.79	41.83
Bra011200.1-P	Field mustard	plastid	35.42	40.11
Bra035044.1-P	Field mustard	plasma membrane, vacuole	20.43	35.33
Bra010115.1-P	Field mustard	plasma membrane	30.97	32.19
Bra005319.1-P	Field mustard	plasma membrane	25.37	31.43
Bra017307.1-P	Field mustard	plasma membrane	29.65	30.61
Bra035884.1-P	Field mustard	plasma membrane	30.31	30.56
Bra023017.1-P	Field mustard	plasma membrane	26.69	30.06

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra016112	EnsemblPlants:Bra016112.1
EnsemblPlants:Bra016112.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M4DHY5	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF494	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:SERK
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002541B54	SEG:seg	:	:	:	:

Description

AT1G71830 (E=2e-221) SERK1, ATSERK1 | SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase

Coordinates

chrA07:+:19353746..19357415

Molecular Weight (calculated)

67115.0 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.070

Length

607 amino acids

Sequence
(BLAST)

001: METIHLVFIL LSLILLPIQT FWLVSANLEG FDLGNAELSG HLVPDLGVLK NLQYLELYSN NITGPIPSNL GNLTNLVSLD LYLNSFTGPI PESLGKLSKL
101: RFLRLNNNTL TGSIPMSLTN ITTLQVLDLS NNQLSGSVPD NGSFSLFTPI RFTFQSVIMS VSELYQQLKL SIDFCSFANN LDLCGPVTSH PCPGSPPFSP
201: PPPFIPPPPV STPSGYGITG AIAGGVAAGA ALLFAAPAIA FAWWSRRKPQ DIFFDVPAEE DPEVHLGQLK RFSLRELQVA SDGFSNKNIL GRGGFGKVYK
301: GRLADGTLVA VKRLKEERTP GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPPSQPPL DWPTRKRIAL GSARGLCYLH
401: DHCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLMDYKD THVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGIMLLEL ITGQRAFDLA RLANDDDVML
501: LDWVKGLLKE KKLEMLVDPD LQTNYEQREL EQVIQVALLC TQGSPMERPK MSEVVRMLEG DGLAERWDEW QKGEILREEI DLSPNPHSDW IVDSTYNLHA
601: VELSGPR

Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)

001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR

Arabidopsis Description

SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.