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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • plasma membrane 8
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG88547
KRG91762
KRG91957
KRG94656
KRH00983
KRH06865
KRH07291
KRH21657
KRH21659
KRH21660
KRH34819
KRH35013
KRH37646
KRH40243
KRH41999
KRH42000
KRH42002
KRH49900
KRH53813
KRH64131
KRH66274
KRH66275
KRH66277
KRH66278
KRH66279
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 KRG88547 AT5G48380.1 19616764
AT1G34210.1 KRH00983 AT5G48380.1 19616764
AT1G34210.1 KRH07291 AT5G48380.1 19616764
AT1G34210.1 KRH21657 AT5G48380.1 19616764
AT1G34210.1 KRH21659 AT5G48380.1 19616764
AT1G34210.1 KRH21660 AT5G48380.1 19616764
AT1G34210.1 KRH37646 AT5G48380.1 19616764
AT1G34210.1 KRH40243 AT5G48380.1 19616764
AT1G34210.1 KRH41999 AT5G48380.1 19616764
AT1G34210.1 KRH42000 AT5G48380.1 19616764
AT1G34210.1 KRH42002 AT5G48380.1 19616764
AT1G34210.1 KRH49900 AT5G48380.1 19616764
AT1G34210.1 KRH66274 AT5G48380.1 19616764
AT1G34210.1 KRH66275 AT5G48380.1 19616764
AT1G34210.1 KRH66277 AT5G48380.1 19616764
AT1G34210.1 KRH66278 AT5G48380.1 19616764
AT1G34210.1 KRH66279 AT5G48380.1 19616764
AT1G71830.1 KRG91762 AT1G71830.1 11397085
AT1G71830.1 KRH35013 AT1G71830.1 11397085
AT1G71830.1 KRH70218 AT1G71830.1 11397085
AT1G71830.1 KRG91762 AT1G71830.1 16621602
AT1G71830.1 KRH35013 AT1G71830.1 16621602
AT1G71830.1 KRH70218 AT1G71830.1 16621602
AT1G71830.1 KRG94656 AT2G33500.1 16473966
AT1G71830.1 KRH06865 AT2G33500.1 16473966
AT1G71830.1 KRG91957 AT3G54840.1 16621602
AT1G71830.1 KRH34819 AT3G54840.1 16621602
AT1G71830.1 KRH53813 AT4G39400.1 16473966
AT1G71830.1 KRH64131 AT4G39400.1 16473966
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG91762 Soybean plasma membrane 94.55 94.55
KRH35013 Soybean plasma membrane 93.75 93.75
VIT_18s0164g00070.t01 Wine grape plasma membrane 91.99 91.99
Solyc04g072570.2.1 Tomato extracellular 91.03 90.3
AT1G34210.1 Thale cress plasma membrane 88.62 88.06
AT1G71830.1 Thale cress plasma membrane 87.82 87.68
CDY36679 Canola plasma membrane 87.18 87.6
CDX96350 Canola plasma membrane 87.66 87.52
Bra003911.1-P Field mustard plasma membrane 79.97 87.39
CDX72833 Canola plasma membrane 87.5 87.36
GSMUA_Achr7P17210_001 Banana cytosol 68.43 86.61
PGSC0003DMT400070819 Potato plasma membrane 87.98 86.59
Os08t0174700-01 Rice plasma membrane 86.54 86.54
TraesCS7A01G293300.3 Wheat plasma membrane 85.58 85.85
TraesCS7D01G291200.3 Wheat plasma membrane 85.42 85.83
TraesCS7B01G182300.1 Wheat plasma membrane 85.26 85.53
TraesCS6D01G186900.2 Wheat plasma membrane 81.57 84.27
TraesCS6A01G203600.2 Wheat cytosol 82.21 84.24
KXG24562 Sorghum plasma membrane 84.94 83.99
Os04t0457800-01 Rice plasma membrane 84.46 83.92
GSMUA_Achr2P14850_001 Banana plastid 83.97 83.84
Zm00001d050868_P004 Maize plasma membrane 83.65 83.79
EES07030 Sorghum plasma membrane 83.97 83.71
GSMUA_AchrUn_... Banana plasma membrane 84.46 83.65
Zm00001d016928_P010 Maize plasma membrane 83.81 83.55
GSMUA_Achr10P... Banana plasma membrane 83.81 83.55
Bra016112.1-P Field mustard plasma membrane 81.25 83.53
Zm00001d024430_P002 Maize plasma membrane 85.26 83.39
KRH10503 Soybean cytosol, plastid 62.5 83.33
TraesCS2D01G321400.1 Wheat mitochondrion 83.49 83.09
TraesCS2B01G340700.1 Wheat plasma membrane 83.49 83.09
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 83.49 83.09
Zm00001d025580_P001 Maize plasma membrane 82.37 82.64
EES12285 Sorghum plasma membrane 82.37 82.64
GSMUA_Achr7P11620_001 Banana plasma membrane 84.78 82.27
TraesCS6B01G223700.3 Wheat plasma membrane 82.53 82.01
HORVU6Hr1G049080.7 Barley plasma membrane 82.53 82.01
KRH43924 Soybean plasma membrane 79.49 80.52
HORVU7Hr1G068990.2 Barley mitochondrion 86.06 79.67
Zm00001d049480_P005 Maize plasma membrane 80.29 76.02
GSMUA_Achr10P... Banana mitochondrion 86.22 74.21
KRH58311 Soybean plasma membrane 73.56 73.91
CDX68299 Canola plasma membrane 83.17 73.2
HORVU2Hr1G080020.6 Barley cytosol 82.69 72.88
KRH42193 Soybean plasma membrane 65.54 66.4
KRH58312 Soybean plasma membrane 64.26 65.2
Os06t0225300-01 Rice plasma membrane 58.17 58.93
KRH45170 Soybean plasma membrane 55.13 55.22
KRH01456 Soybean plasma membrane 54.81 54.9
KRH69595 Soybean plasma membrane 54.33 54.33
KRG93765 Soybean plasma membrane 54.33 54.33
KRH59316 Soybean plasma membrane 53.04 54.26
KRH74566 Soybean plasma membrane 54.17 54.25
KRH43169 Soybean plasma membrane 52.72 53.93
KRH18305 Soybean plasma membrane 53.69 53.69
KRG97568 Soybean plasma membrane 51.76 53.3
KRH75229 Soybean plasma membrane 51.92 52.17
KRH71075 Soybean plasma membrane 51.44 51.69
KRH31305 Soybean plasma membrane 52.08 51.34
KRH59648 Soybean golgi, plasma membrane 47.44 49.66
KRH72362 Soybean plasma membrane 49.68 48.59
KRH40995 Soybean plasma membrane 47.6 48.29
KRH02989 Soybean plasma membrane 49.52 47.98
KRH11043 Soybean plasma membrane 43.59 47.89
KRH21243 Soybean plasma membrane 47.6 47.6
KRH13485 Soybean golgi, plasma membrane 20.19 35.69
KRH63411 Soybean plasma membrane 31.73 34.14
KRH56966 Soybean plasma membrane 31.41 33.45
KRH54498 Soybean plasma membrane 32.37 33.44
KRH39710 Soybean plasma membrane 31.73 33.28
KRH76408 Soybean plasma membrane 31.57 33.11
KRH03414 Soybean plasma membrane 31.73 32.84
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
EntrezGene:100813918MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EMBL:ACUP02000756
EnsemblPlantsGene:GLYMA_02G076100GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0004675GO:GO:0004871GO:GO:0005102GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
GO:GO:0038023UniProt:I1JD93InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KRH70218
ProteinID:KRH70218ProteinID:KRH70218.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00069PFAM:PF00560PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF494InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002337A34
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:6645092..6651817
Molecular Weight (calculated)
69191.1 Da
IEP (calculated)
5.382
GRAVY (calculated)
-0.166
Length
624 amino acids
Sequence
(BLAST)
001: MERELWGSVF IYWVLLARPL WLVSANMEGD ALHSLRTNLQ DPNNVLQSWD PTLVNPCTWF HVTCNNDNSV IRVDLGNAVL SGQLVPQLGQ LKNLQYLELY
101: SNNISGPIPN DLGNLTNLVS LDLYLNRFSG PIPESLGKLS KLRFLRLNNN SLTGPIPMPL TNITALQVLD LSNNQLSGVV PDNGSFSLFT PISFNNNLDL
201: CGPVTGHPCP GSPPFSPPPP FVPPSPISAP EGNSATGAIA GGVAAGAALL FAAPAIVFAW WRRRKPQEFF FDVPAEEDPE VHLGQLKRFS LRELQVATDT
301: FSNKNILGRG GFGKVYKGRL TDGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR LRGFCMTPTE RLLVYPYMAN GSVASCLRER PAHQQPLDWP
401: TRKRIALGSA RGLSYLHDHC DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK SSEKTDVFGY GIMLLELITG
501: QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLHS NYIDAEVEQL IQVALLCSQG SPMDRPKMSE VVRMLEGDGL AERWDEWQKV EVLRQEVELA
601: PHPNSDWIVD STENLHAVEL SGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.