CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21659	Soybean	cytosol	47.75	85.59
KRH66279	Soybean	cytosol	16.31	37.7
VIT_05s0094g01290.t01	Wine grape	mitochondrion	10.4	34.38
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	20.57	33.72
KRG93454	Soybean	mitochondrion	30.73	32.91
CDY38095	Canola	plasma membrane	20.57	32.83
CDX85492	Canola	plasma membrane	20.33	32.09
CDY38092	Canola	plasma membrane	20.33	32.09
CDY07991	Canola	plasma membrane	19.39	31.66
KRH18545	Soybean	plasma membrane	21.99	31.63
CDX69430	Canola	extracellular	17.49	30.96
KRH42002	Soybean	plasma membrane	45.39	30.43
Bra001255.1-P	Field mustard	plasma membrane	18.44	30.12
Bra040380.1-P	Field mustard	extracellular	16.55	29.79
KRH41999	Soybean	cytosol, golgi, plasma membrane	42.32	29.11
KRH18546	Soybean	extracellular	15.84	28.63
CDY16992	Canola	cytosol, plasma membrane, plastid	13.48	28.36
KRH40243	Soybean	plasma membrane	40.9	28.04
KRH28321	Soybean	extracellular, plasma membrane	17.73	27.88
KRH07291	Soybean	plasma membrane	40.19	27.69
KRH00983	Soybean	nucleus, plasma membrane	40.19	27.51
KRH66278	Soybean	cytosol	29.55	27.23
KRH77166	Soybean	plasma membrane	17.02	26.87
KRH42000	Soybean	vacuole	23.64	25.91
KRH49900	Soybean	cytosol	15.37	25.49
Bra006366.1-P	Field mustard	mitochondrion	19.39	25.23
CDX70708	Canola	extracellular, plasma membrane, vacuole	20.8	24.58
CDX85334	Canola	plasma membrane	35.93	24.4
CDY48749	Canola	plasma membrane	34.99	23.76
CDY05685	Canola	plasma membrane	34.75	23.52
AT5G48380.1	Thale cress	plasma membrane	34.28	23.39
KRH37646	Soybean	cytosol	13.48	23.36
Bra020705.1-P	Field mustard	plasma membrane	30.26	23.19
KRH66274	Soybean	plasma membrane	24.35	22.84
KRH66277	Soybean	plasma membrane	24.35	22.84
Bra037490.1-P	Field mustard	plastid	23.17	20.94
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	23.17	20.94
KRG88547	Soybean	cytosol	15.13	19.69
Bra038824.1-P	Field mustard	cytosol	14.89	19.03
KRH66275	Soybean	mitochondrion, plasma membrane	9.93	16.87
KRH21660	Soybean	cytosol	0.95	2.52
Os01t0891300-01	Rice	plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	UniProt:A0A0R0H291	EMBL:ACUP02008360
EnsemblPlantsGene:GLYMA_13G251900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	EnsemblPlants:KRH21657	ProteinID:KRH21657	ProteinID:KRH21657.1	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR44101
PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix
UniParc:UPI0006ED67B2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:35872841..35874975

Molecular Weight (calculated)

47867.7 Da

IEP (calculated)

7.839

GRAVY (calculated)

-0.145

Length

423 amino acids

Sequence
(BLAST)

001: LDAESDVYCL QTIKKLDQFN HLSSWDFKSN TEGDMCRFSG VECWNNVKVI GLSLSNKGLK GQFPSCVENF AWLQTLNLSH NELSGYILSD ISTSQLTYLT
101: SLDLSNNNFY GEIPKGIADL SGLITLRLDS NQLSGQIPQE LGLLSQLIDF SVANNLLEGP VPVFVSNVNV SLSYANNSGL CGGALGSCDE SLFGRTFWYS
201: FIIGFVSSAT SVLVSFMVYY APWTEFKKRR SNAIHPLMKK QNLQKNTRQE AELLPLAMQE QGSKELSRLL ERLIPRMSFK ELCKATDYFS TDNVLGIGTT
301: GIMYKAKVPN NCFLAVKRLY GADEYKREFL LETMILGRHR HRNIAPLVGF CIEKRERILV YKYMSNGRLS DWFHSDEGDQ KIKLEWPERI HIALGIARGL
401: SWLHKRCKIF HLNLDSECAP LCL

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.