CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66275	Soybean	mitochondrion, plasma membrane	65.54	85.54
KRH37646	Soybean	cytosol	58.15	77.46
KRH66277	Soybean	plasma membrane	99.69	71.84
KRH66274	Soybean	plasma membrane	99.69	71.84
Bra038824.1-P	Field mustard	cytosol	71.08	69.79
KRH07291	Soybean	plasma membrane	93.85	49.67
Bra037490.1-P	Field mustard	plastid	70.46	48.93
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	70.46	48.93
KRH00983	Soybean	nucleus, plasma membrane	80.92	42.56
KRH40243	Soybean	plasma membrane	79.69	41.98
Bra020705.1-P	Field mustard	plasma membrane	71.08	41.85
VIT_00s2085g00010.t01	Wine grape	plasma membrane	78.77	41.36
KRH66278	Soybean	cytosol	57.85	40.96
PGSC0003DMT400071183	Potato	plasma membrane	72.92	38.66
Solyc06g082920.2.1	Tomato	plasma membrane	72.92	38.66
CDY48749	Canola	plasma membrane	71.38	37.24
CDX85334	Canola	plasma membrane	70.77	36.92
CDY05685	Canola	plasma membrane	70.77	36.8
AT5G48380.1	Thale cress	plasma membrane	69.23	36.29
KRH49900	Soybean	cytosol	27.38	34.9
KRH21659	Soybean	cytosol	23.38	32.2
KRH21660	Soybean	cytosol	12.62	25.79
KRH42000	Soybean	vacuole	30.46	25.65
KRH41999	Soybean	cytosol, golgi, plasma membrane	38.46	20.33
KRH42002	Soybean	plasma membrane	37.85	19.49
KRH21657	Soybean	cytosol	19.69	15.13
KRG93454	Soybean	mitochondrion	14.46	11.9
CDY16992	Canola	cytosol, plasma membrane, plastid	3.69	5.97
CDX69430	Canola	extracellular	4.0	5.44
CDY38095	Canola	plasma membrane	3.69	4.53
CDX85492	Canola	plasma membrane	3.69	4.48
CDY38092	Canola	plasma membrane	3.69	4.48
KRH77166	Soybean	plasma membrane	3.69	4.48
KRH28321	Soybean	extracellular, plasma membrane	3.69	4.46
KRH66279	Soybean	cytosol	1.23	2.19
Bra006366.1-P	Field mustard	mitochondrion	2.15	2.15
Bra040380.1-P	Field mustard	extracellular	1.54	2.13
CDX70708	Canola	extracellular, plasma membrane, vacuole	2.15	1.96
Bra001255.1-P	Field mustard	plasma membrane	1.23	1.54
CDY07991	Canola	plasma membrane	1.23	1.54
KRH18546	Soybean	extracellular	0.0	0.0
KRH18545	Soybean	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	EnsemblPlantsGene:GLYMA_U005600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	UniProt:K7KE20	EnsemblPlants:KRG88547	ProteinID:KRG88547	ProteinID:KRG88547.1	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI00023C1C0F	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_151:+:8285..9262

Molecular Weight (calculated)

36378.7 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.208

Length

325 amino acids

Sequence
(BLAST)

001: MKLSDIMKAT NNFSNTNMIG TGRTGTVYKA VLDDGTTLMV KRLQESQYTE KQFMSEMGTL GTVKHRNLVP LLGFCMAKRE RLLVYKNMPN GILHDQLHPA
101: DGVSTLDWTT RLKIAIGAAK GLAWLHHSCN PCIIHRNISS KCMLLDADFE PKISDFGLAR LMNPIDTHLS TFVNGEFGDL GYVAPEYTRT LVATTKGDIY
201: SFGTVLLELV TGERPTNVYK APETFKGNLV EWITELTSNA EHHDAIDESL VSKDADSELF QFLKVVCNCV SPTPKERPTM FEVYQLLRAI GGRYNFTTED
301: EILVPTDIGD TDKMEEFIVA REGSY

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.