Factsheet for Solyc06g082920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g072570.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	Solyc04g072570.2.1	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071183	Potato	plasma membrane	95.43	95.43
GSMUA_Achr6P28640_001	Banana	plastid	28.55	74.47
KRG88547	Soybean	cytosol	38.66	72.92
KRH37646	Soybean	cytosol	28.87	72.54
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	45.68	69.83
Bra038824.1-P	Field mustard	cytosol	37.19	68.88
VIT_00s2085g00010.t01	Wine grape	plasma membrane	69.33	68.66
KRH66277	Soybean	plasma membrane	49.1	66.74
KRH66274	Soybean	plasma membrane	48.94	66.52
KRH66275	Soybean	mitochondrion, plasma membrane	26.59	65.46
KRH07291	Soybean	plasma membrane	65.25	65.15
KRH00983	Soybean	nucleus, plasma membrane	65.09	64.56
KRH40243	Soybean	plasma membrane	64.44	64.02
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	47.96	62.82
Bra037490.1-P	Field mustard	plastid	47.96	62.82
EES09539	Sorghum	plasma membrane	60.36	61.26
Zm00001d007277_P001	Maize	plasma membrane	58.24	60.82
HORVU4Hr1G014760.3	Barley	plasma membrane	60.03	60.73
Bra020705.1-P	Field mustard	plasma membrane	54.65	60.69
TraesCS4B01G086300.1	Wheat	plasma membrane	59.87	60.56
TraesCS4D01G084000.1	Wheat	plasma membrane	59.87	60.56
KRH66278	Soybean	cytosol	45.19	60.35
TraesCS4A01G229800.1	Wheat	plasma membrane	59.54	60.23
AT5G48380.1	Thale cress	plasma membrane	59.71	59.03
HORVU1Hr1G064780.1	Barley	plasma membrane	58.08	58.94
TraesCS1A01G259600.1	Wheat	plasma membrane	58.08	58.84
TraesCS1D01G259400.1	Wheat	plasma membrane	57.91	58.77
EES19530	Sorghum	plasma membrane	58.08	58.75
CDX85334	Canola	plasma membrane	59.54	58.59
TraesCS1B01G269900.1	Wheat	plasma membrane	57.75	58.51
CDY48749	Canola	plasma membrane	59.38	58.43
CDY05685	Canola	plasma membrane	59.54	58.4
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	39.64	58.13
Zm00001d038195_P001	Maize	plasma membrane	58.73	57.14
Zm00001d039672_P001	Maize	plasma membrane	19.58	46.88
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	16.64	46.79
Solyc07g006480.2.1	Tomato	plasma membrane	47.47	44.56
Solyc12g096720.1.1	Tomato	cytosol	10.28	44.37
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	43.07	43.78
Solyc02g087460.1.1	Tomato	plasma membrane	42.41	43.26
Solyc05g006570.1.1	Tomato	plasma membrane	42.9	43.11
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	17.78	43.08
KXG33866	Sorghum	cytosol	17.13	42.68
TraesCS3A01G401300.1	Wheat	cytosol	16.64	42.5
CDX69430	Canola	extracellular	16.31	41.84
TraesCS3B01G434100.1	Wheat	plasma membrane	18.27	41.48
TraesCS3D01G396100.1	Wheat	plasma membrane	17.94	41.35
CDY16992	Canola	cytosol, plasma membrane, plastid	13.54	41.29
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	16.48	41.22
TraesCS3D01G395700.1	Wheat	plasma membrane	17.94	40.89
TraesCS3B01G434000.1	Wheat	plasma membrane	17.29	40.61
TraesCS3B01G433700.1	Wheat	plasma membrane	17.46	40.53
TraesCS3A01G401200.1	Wheat	plasma membrane	17.78	40.37
TraesCS7A01G410600.1	Wheat	extracellular	17.13	40.08
CDY38095	Canola	plasma membrane	17.29	40.0
TraesCS3A01G400800.1	Wheat	extracellular	17.29	39.85
TraesCS3B01G434200.1	Wheat	plasma membrane	17.62	39.56
CDX85492	Canola	plasma membrane	17.29	39.55
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	17.13	39.33
CDY38092	Canola	plasma membrane	17.13	39.18
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	16.64	39.08
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	12.23	38.07
TraesCS3A01G401000.1	Wheat	cytosol	10.44	37.21
Solyc11g015910.1.1	Tomato	extracellular	8.48	37.14
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	17.29	36.93
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	15.01	36.8
Bra040380.1-P	Field mustard	extracellular	14.03	36.6
TraesCS3B01G433800.1	Wheat	extracellular	13.21	36.0
CDY07991	Canola	plasma membrane	15.01	35.52
Bra001255.1-P	Field mustard	plasma membrane	14.36	33.98
Solyc02g092040.1.1	Tomato	extracellular	14.68	33.71
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	15.66	33.57
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	16.8	33.33
Solyc12g096710.1.1	Tomato	plasma membrane	42.09	31.97
TraesCS3D01G395800.1	Wheat	plastid	18.11	31.27
Bra006366.1-P	Field mustard	mitochondrion	16.31	30.77
CDX70708	Canola	extracellular, plasma membrane, vacuole	17.13	29.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K4CAE7
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	PFAM:PF00069	PFscan:PS50011	PFscan:PS51257	PANTHER:PTHR44101
PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g082920.2
EnsemblPlants:Solyc06g082920.2.1	TMHMM:TMhelix	UniParc:UPI0002765BD5	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:48546567..48549100

Molecular Weight (calculated)

67826.1 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.113

Length

613 amino acids

Sequence
(BLAST)

001: MALDKRALTT FAAILIYLVL SCAVCSAVQS DIDCLKSIKD SFEDPLNFLN TTWKFDNQTE GFICKFAGIQ CWHPDETRVL SISLPDMRLK GKFPRGLKNC
101: TSITSLDLSS NELHGSIPND ISKIIGFVVM LDLSSNNFSG EIPVNLANCS FLNSLRLDDN QFTGPIPAEI GLLGRLKNFN VANNRLTGAV PRFTNATFPA
201: EIYANNAGLC GPPLTLCEDI AKKPRTGIIV GAAVGGVTLG AVLLTIGMFL YMRKISRKRK NADDPEGNKW AKSIKGSKAI QLSMFEKSTS KMRLSDLMKA
301: TNNFSKNNIV GSGRTGTFYK AVLDDGTSLM VKRLQNTQHS EKEFTSEMAT LGNVKHRNLV PLLGFCMAKK ERLLVYKDMP NGTLHDRLHS LSEGEKTLEW
401: PMRMKIAIGA AKGFAWLHHN CNPRIIHRNI SSKCILLDVE YEPKISDFGL ARLMNPVDTH LSTFVNGEFG DFGYVAPEYA RTLMATPKGD VYSFGVVLLE
501: LVTGETPTSV AKAPETFKGN LVEWITQLSG ESKLQDAIDH SLSSKGYDSE IFQVLKVACR CVLSAAPKER PTMFELYQLL RAIGERYHFT TDDDIMMPES
601: DSGFQMDELI VAQ

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.