Factsheet for TraesCS3B01G434200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G395700.1	Wheat	plasma membrane	89.38	90.71
TraesCS3B01G434100.1	Wheat	plasma membrane	83.15	84.07
TraesCS3A01G401000.1	Wheat	cytosol	48.35	76.74
TraesCS3B01G434000.1	Wheat	plasma membrane	73.26	76.63
TraesCS3B01G433700.1	Wheat	plasma membrane	63.37	65.53
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	58.24	51.46
TraesCS3B01G433800.1	Wheat	extracellular	40.29	48.89
Os01t0891700-01	Rice	plasma membrane	54.21	48.37
CDY38095	Canola	plasma membrane	41.03	42.26
CDX85492	Canola	plasma membrane	40.66	41.42
TraesCS2B01G364300.1	Wheat	extracellular	32.97	41.1
CDY38092	Canola	plasma membrane	40.29	41.04
CDX69430	Canola	extracellular	35.9	41.0
CDY07991	Canola	plasma membrane	37.36	39.38
CDY16992	Canola	cytosol, plasma membrane, plastid	28.21	38.31
Bra040380.1-P	Field mustard	extracellular	32.6	37.87
Bra001255.1-P	Field mustard	plasma membrane	35.16	37.07
Bra006366.1-P	Field mustard	mitochondrion	40.66	34.15
CDX70708	Canola	extracellular, plasma membrane, vacuole	43.59	33.24
TraesCS5B01G161200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.7	32.39
PGSC0003DMT400070667	Potato	cytosol	25.64	31.67
VIT_05s0094g01290.t01	Wine grape	mitochondrion	13.19	28.12
TraesCS1B01G269900.1	Wheat	plasma membrane	60.44	27.27
TraesCS4B01G086300.1	Wheat	plasma membrane	46.52	20.96
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	26.74	19.78
CDY48749	Canola	plasma membrane	43.59	19.1
PGSC0003DMT400075494	Potato	plasma membrane	39.93	18.73
VIT_00s0220g00120.t01	Wine grape	plasma membrane	41.76	18.36
CDY05685	Canola	plasma membrane	41.76	18.24
AT5G48380.1	Thale cress	plasma membrane	41.39	18.23
PGSC0003DMT400071183	Potato	plasma membrane	40.66	18.11
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	26.37	17.96
VIT_00s2085g00010.t01	Wine grape	plasma membrane	40.29	17.77
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	26.01	17.71
PGSC0003DMT400075495	Potato	plasma membrane	38.1	17.69
Solyc06g082920.2.1	Tomato	plasma membrane	39.56	17.62
CDX85334	Canola	plasma membrane	39.93	17.5
Bra020705.1-P	Field mustard	plasma membrane	33.33	16.49
Solyc07g006480.2.1	Tomato	plasma membrane	36.26	15.16
Solyc12g096710.1.1	Tomato	plasma membrane	38.46	13.01
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	16.48	10.77
PGSC0003DMT400070666	Potato	plastid	16.85	9.87
Bra037490.1-P	Field mustard	plastid	16.12	9.4
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	15.02	8.76
GSMUA_Achr6P28640_001	Banana	plastid	2.93	3.4
Solyc12g096720.1.1	Tomato	cytosol	1.47	2.82
Bra038824.1-P	Field mustard	cytosol	3.3	2.72
TraesCS2B01G364400.1	Wheat	vacuole	2.2	2.32
KRH21660	Soybean	cytosol	0.73	1.26
PGSC0003DMT400070694	Potato	cytosol	0.73	0.94

Protein Annotations

EnsemblPlants:TraesCS3B01G434200.1	EnsemblPlantsGene:TraesCS3B01G434200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44101	PANTHER:PTHR44101:SF3
PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr3B:-:672769537..672770358

Molecular Weight (calculated)

30122.2 Da

IEP (calculated)

7.191

GRAVY (calculated)

0.137

Length

273 amino acids

Sequence
(BLAST)

001: MLAMADDTKF LLSVLLLSCS SLCFGSEADI QCLKSVQQSV IDPNGVLKSS WYFENPYPNY AYICRFTGVE CWYPGENRVL SLRLGNLGLE GPFPQGLQNC
101: SSVTGLDLSN NNFSGPIPQD ISRQVPYLTS LDLSYNSFLG SIPQNISNMT YLNVLFLQHN QLSGQIPPQF DLLARLTAFN VAENLLSGPI PSLLAVRFSA
201: SSFAGNQGLC GAPLDDCPPS RRRWRPVRIS LHRLNDQSSI GAAVGFVVGF VVAFYFPHCF VCSERLRAYV VRI

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.