Factsheet for TraesCS3B01G433800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	63.56	46.28
TraesCS3B01G434000.1	Wheat	plasma membrane	47.56	41.0
TraesCS3B01G434200.1	Wheat	plasma membrane	48.89	40.29
TraesCS3B01G433700.1	Wheat	plasma membrane	47.11	40.15
TraesCS3B01G434100.1	Wheat	plasma membrane	45.33	37.78
TraesCS2B01G364300.1	Wheat	extracellular	32.89	33.79
Bra040380.1-P	Field mustard	extracellular	34.67	33.19
CDY07991	Canola	plasma membrane	37.33	32.43
Bra001255.1-P	Field mustard	plasma membrane	36.0	31.27
CDY38095	Canola	plasma membrane	35.56	30.19
CDX85492	Canola	plasma membrane	35.56	29.85
CDY38092	Canola	plasma membrane	35.11	29.48
CDX69430	Canola	extracellular	29.78	28.03
TraesCS5B01G161200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	32.0	25.35
Bra006366.1-P	Field mustard	mitochondrion	35.56	24.62
CDX70708	Canola	extracellular, plasma membrane, vacuole	38.22	24.02
PGSC0003DMT400070667	Potato	cytosol	23.56	23.98
CDY16992	Canola	cytosol, plasma membrane, plastid	20.89	23.38
TraesCS1B01G269900.1	Wheat	plasma membrane	46.22	17.19
VIT_05s0094g01290.t01	Wine grape	mitochondrion	9.78	17.19
TraesCS4B01G086300.1	Wheat	plasma membrane	40.44	15.02
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	23.11	14.09
CDY48749	Canola	plasma membrane	38.67	13.96
PGSC0003DMT400075495	Potato	plasma membrane	36.44	13.95
PGSC0003DMT400075494	Potato	plasma membrane	36.0	13.92
CDY05685	Canola	plasma membrane	37.33	13.44
AT5G48380.1	Thale cress	plasma membrane	36.89	13.39
CDX85334	Canola	plasma membrane	36.89	13.32
Solyc06g082920.2.1	Tomato	plasma membrane	36.0	13.21
PGSC0003DMT400071183	Potato	plasma membrane	35.56	13.05
VIT_00s0220g00120.t01	Wine grape	plasma membrane	35.56	12.88
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	22.22	12.47
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	22.22	12.47
VIT_00s2085g00010.t01	Wine grape	plasma membrane	33.78	12.28
Solyc07g006480.2.1	Tomato	plasma membrane	34.67	11.94
Bra020705.1-P	Field mustard	plasma membrane	28.0	11.41
Solyc12g096710.1.1	Tomato	plasma membrane	36.0	10.04
PGSC0003DMT400070666	Potato	plastid	13.78	6.65
Bra037490.1-P	Field mustard	plastid	9.78	4.7
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	8.44	4.55
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	8.44	4.06
Solyc12g096720.1.1	Tomato	cytosol	0.0	0.0
Bra038824.1-P	Field mustard	cytosol	0.0	0.0
TraesCS2B01G364400.1	Wheat	vacuole	0.0	0.0
PGSC0003DMT400070694	Potato	cytosol	0.0	0.0
GSMUA_Achr6P28640_001	Banana	plastid	0.0	0.0
KRH21660	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3B01G433800.1	EnsemblPlantsGene:TraesCS3B01G433800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44101	PFAM:PF13855
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr3B:-:672524851..672525528

Molecular Weight (calculated)

24492.1 Da

IEP (calculated)

5.144

GRAVY (calculated)

0.076

Length

225 amino acids

Sequence
(BLAST)

001: MHGYTKLVVW LLLLSILSSY FAHGISDSMS NIQCLKDLKQ SLIDPNGRLK PSWNFTVVDR ADVYSDAICS FTCVVCWSSG DSRVLSLSLG KLGLECPFPR
101: GLELCTSMTT LDLSNNNFSG PLLEHISQQM TYITYLDLSN NSFSGVIPAS IANMTYLSTL ALHHNQFDSE IPVQLGNTSR LISFNVADNS LSSPVPDSAA
201: LPASQLHGQS RALRGAAGQE VQEEV

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.