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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003911.1-P
Bra016112.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G48380.1 Bra003911.1-P AT1G71830.1 19616764
AT5G48380.1 Bra016112.1-P AT1G71830.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001255.1-P Field mustard plasma membrane 66.38 60.23
TraesCS3D01G395600.1 Wheat endoplasmic reticulum, vacuole 34.47 37.16
TraesCS3B01G433800.1 Wheat extracellular 33.19 34.67
TraesCS3B01G433700.1 Wheat plasma membrane 38.72 34.47
TraesCS3D01G395900.1 Wheat extracellular, golgi, plasma membrane 37.02 34.39
TraesCS3D01G395400.1 Wheat extracellular, golgi, plasma membrane 35.74 34.29
TraesCS3A01G401300.1 Wheat cytosol 34.89 34.17
TraesCS3D01G395100.1 Wheat extracellular, plasma membrane 37.87 34.1
TraesCS3D01G396100.1 Wheat plasma membrane 38.3 33.83
TraesCS3A01G401100.1 Wheat extracellular, plasma membrane 40.85 33.45
Os01t0892300-01 Rice extracellular, golgi, plasma membrane 39.57 33.33
TraesCS3B01G434100.1 Wheat plasma membrane 38.3 33.33
TraesCS3D01G395700.1 Wheat plasma membrane 37.87 33.09
TraesCS3B01G434000.1 Wheat plasma membrane 36.6 32.95
KXG33866 Sorghum cytosol 34.47 32.93
TraesCS3B01G434200.1 Wheat plasma membrane 37.87 32.6
TraesCS3A01G400700.1 Wheat extracellular, plasma membrane 37.02 32.58
TraesCS3A01G400900.1 Wheat extracellular, plasma membrane 39.15 32.17
HORVU3Hr1G090040.1 Barley extracellular, plasma membrane 34.04 32.0
TraesCS3A01G400800.1 Wheat extracellular 36.17 31.95
TraesCS3A01G401200.1 Wheat plasma membrane 36.6 31.85
Zm00001d039672_P001 Maize plasma membrane 34.04 31.25
KRH66279 Soybean cytosol 23.83 30.6
TraesCS3B01G433900.1 Wheat extracellular, mitochondrion, nucleus, plasma membrane 40.0 30.42
Os01t0891601-01 Rice extracellular, golgi, plasma membrane 33.19 30.23
TraesCS7A01G410600.1 Wheat extracellular 32.34 29.01
Bra006366.1-P Field mustard mitochondrion 39.15 28.31
Os01t0891700-01 Rice plasma membrane 34.89 26.8
TraesCS3D01G395800.1 Wheat plastid 36.6 24.23
TraesCS3A01G401000.1 Wheat cytosol 17.45 23.84
PGSC0003DMT400070667 Potato cytosol 21.7 23.08
Bra037831.1-P Field mustard extracellular, plasma membrane, vacuole 25.96 22.34
Bra029968.1-P Field mustard extracellular 25.11 21.15
KRH21657 Soybean cytosol 29.79 16.55
KRH66278 Soybean cytosol 31.49 16.12
KRH40243 Soybean plasma membrane 39.57 15.07
PGSC0003DMT400075495 Potato plasma membrane 37.45 14.97
PGSC0003DMT400075494 Potato plasma membrane 37.02 14.95
Os05t0414700-01 Rice plasma membrane 38.3 14.83
Zm00001d007277_P001 Maize plasma membrane 36.6 14.65
TraesCS1B01G269900.1 Wheat plasma membrane 37.45 14.55
VIT_00s2085g00010.t01 Wine grape plasma membrane 38.3 14.54
KRH07291 Soybean plasma membrane 37.87 14.5
KRH00983 Soybean nucleus, plasma membrane 37.45 14.24
AT5G48380.1 Thale cress plasma membrane 37.45 14.19
PGSC0003DMT400071183 Potato plasma membrane 37.02 14.19
Solyc06g082920.2.1 Tomato plasma membrane 36.6 14.03
EES09539 Sorghum plasma membrane 35.74 13.91
HORVU1Hr1G064780.1 Barley plasma membrane 35.32 13.74
KRH42002 Soybean plasma membrane 36.6 13.63
Bra016244.1-P Field mustard plasma membrane 34.47 13.59
TraesCS1D01G259400.1 Wheat plasma membrane 34.89 13.58
TraesCS1A01G259600.1 Wheat plasma membrane 34.89 13.55
PGSC0003DMT400070664 Potato cytosol, plasma membrane, plastid 21.28 13.55
VIT_00s0220g00120.t01 Wine grape plasma membrane 35.74 13.53
EES19530 Sorghum plasma membrane 34.47 13.37
VIT_05s0094g01290.t01 Wine grape mitochondrion 7.23 13.28
PGSC0003DMT400070657 Potato peroxisome, plasma membrane, plastid 22.55 13.22
TraesCS4B01G086300.1 Wheat plasma membrane 34.04 13.2
HORVU4Hr1G014760.3 Barley plasma membrane 34.04 13.2
TraesCS4D01G084000.1 Wheat plasma membrane 34.04 13.2
Bra024650.1-P Field mustard plasma membrane 32.77 12.88
TraesCS4A01G229800.1 Wheat plasma membrane 33.19 12.87
GSMUA_Achr9P08150_001 Banana cytosol, nucleus, plastid 21.7 12.72
Zm00001d038195_P001 Maize plasma membrane 34.04 12.7
KRH41999 Soybean cytosol, golgi, plasma membrane 33.19 12.68
Solyc07g006480.2.1 Tomato plasma membrane 34.89 12.56
Bra033046.1-P Field mustard cytosol 30.21 12.37
Bra020705.1-P Field mustard plasma membrane 28.09 11.96
Bra025334.1-P Field mustard plasma membrane 30.21 11.95
Solyc12g096710.1.1 Tomato plasma membrane 36.6 10.66
Os11t0249900-01 Rice plasma membrane 17.02 7.98
GSMUA_Achr2P05730_001 Banana cytosol, peroxisome, plasma membrane 11.91 6.7
PGSC0003DMT400070666 Potato plastid 10.64 5.36
Bra037490.1-P Field mustard plastid 9.79 4.91
KRH66274 Soybean plasma membrane 7.66 3.99
KRH66277 Soybean plasma membrane 7.66 3.99
GSMUA_Achr6P28640_001 Banana plastid 2.13 2.13
KRH66275 Soybean mitochondrion, plasma membrane 2.13 2.01
Bra038824.1-P Field mustard cytosol 2.55 1.81
KRH42000 Soybean vacuole 2.55 1.55
KRG88547 Soybean cytosol 2.13 1.54
Os01t0891300-01 Rice plasma membrane, plastid 2.13 1.39
KRH21660 Soybean cytosol 0.85 1.26
KRH37646 Soybean cytosol 1.28 1.23
Solyc12g096720.1.1 Tomato cytosol 0.43 0.7
PGSC0003DMT400070694 Potato cytosol 0.43 0.47
KRH49900 Soybean cytosol 0.43 0.39
KRH21659 Soybean cytosol 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1EnsemblPlantsGene:Bra040380EnsemblPlants:Bra040380.1EnsemblPlants:Bra040380.1-PGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR001611
InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptUniProt:M4FH02PFAM:PF08263
PFAM:PF13855PANTHER:PTHR44101SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002544768
SEG:seg:::::
Description
AT5G48380 (E=2e-046) | leucine-rich repeat family protein / protein kinase family protein
Coordinates
chrA01:+:27923925..27924632
Molecular Weight (calculated)
26050.3 Da
IEP (calculated)
8.562
GRAVY (calculated)
0.085
Length
235 amino acids
Sequence
(BLAST)
001: MVAKLVCAIF FRSCLRVLLV SSLNYSFETD INCLKSLKSQ LQDPKAHLSN WIFGNYSEGY ICKFFGVECW GSEQNRVLSI NLGGYGLKGE FPSGVTLCTS
101: MESLNLTGNN LYGTIPSEFF SFIPYLVTLD LSHNNFASNI PASLSNMYYL KTLLLDHNWF TGHLPSGLGS SPRLQQFSVS HNDLDGPVPD FYSMAIIAAS
201: ISTAAFFPVG ASVGWFYVGK TQKQPSKKRS KILTR
Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
Arabidopsis Description
BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.