Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 3
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18672 | Canola | mitochondrion, plasma membrane | 86.45 | 97.12 |
| AT5G65830.1 | Thale cress | extracellular, plasma membrane | 81.69 | 79.93 |
| Bra029968.1-P | Field mustard | extracellular | 79.85 | 78.14 |
| VIT_07s0151g00470.t01 | Wine grape | plasma membrane | 68.86 | 69.63 |
| PGSC0003DMT400093490 | Potato | extracellular | 67.4 | 68.91 |
| Solyc02g092040.1.1 | Tomato | extracellular | 67.03 | 68.54 |
| KRH28321 | Soybean | extracellular, plasma membrane | 64.47 | 65.43 |
| KRH77166 | Soybean | plasma membrane | 63.37 | 64.55 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 61.9 | 61.45 |
| GSMUA_Achr2P08610_001 | Banana | plasma membrane | 62.27 | 60.71 |
| GSMUA_Achr3P25790_001 | Banana | extracellular, plasma membrane, vacuole | 62.27 | 60.5 |
| GSMUA_Achr3P30680_001 | Banana | extracellular, plasma membrane | 63.37 | 60.28 |
| Zm00001d052058_P001 | Maize | extracellular, plasma membrane | 60.81 | 59.29 |
| TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.54 | 59.15 |
| GSMUA_Achr7P27510_001 | Banana | extracellular, plasma membrane | 54.58 | 59.13 |
| HORVU0Hr1G012140.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 61.9 | 58.88 |
| TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.54 | 58.54 |
| Zm00001d018344_P001 | Maize | extracellular, plasma membrane | 60.44 | 58.51 |
| EES07661 | Sorghum | extracellular, plasma membrane | 60.81 | 58.25 |
| TraesCS5A01G163900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.17 | 58.19 |
| Os09t0131200-01 | Rice | plasma membrane | 58.61 | 56.74 |
| GSMUA_Achr1P14260_001 | Banana | plastid | 61.54 | 55.26 |
| Bra001255.1-P | Field mustard | plasma membrane | 26.74 | 28.19 |
| Bra040380.1-P | Field mustard | extracellular | 22.34 | 25.96 |
| Bra006366.1-P | Field mustard | mitochondrion | 24.54 | 20.62 |
| Bra033046.1-P | Field mustard | cytosol | 34.07 | 16.2 |
| Bra016244.1-P | Field mustard | plasma membrane | 35.16 | 16.11 |
| Bra025334.1-P | Field mustard | plasma membrane | 34.8 | 15.99 |
| Bra024650.1-P | Field mustard | plasma membrane | 34.43 | 15.72 |
| Bra020705.1-P | Field mustard | plasma membrane | 24.54 | 12.14 |
| Bra037490.1-P | Field mustard | plastid | 15.02 | 8.76 |
| Bra038824.1-P | Field mustard | cytosol | 4.4 | 3.63 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra037831 | EnsemblPlants:Bra037831.1 | EnsemblPlants:Bra037831.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_4 | UniProt:M4F9R8 | PFAM:PF12799 |
| PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44839 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002541BAD | SEG:seg | : | : | : | : |
Description
AT5G65830 (E=1e-117) | leucine-rich repeat family protein
Coordinates
chrA09:-:3826536..3827357
Molecular Weight (calculated)
29278.9 Da
IEP (calculated)
7.855
GRAVY (calculated)
-0.098
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MPANHHRLIL LFLLTFETAR RSASGDPNDE ACLANLHQSL EDPANNLHNW TKPFFSNPCP GFDSYLHGVT CNNGRVYKLS LTNLSLRGSI SPFLSNCTNL
101: QSLDLSSNQI SGEIPPAIQS LSNLAVLNLS SNRLSGEISP QLARCSFLNV IDLHGNGLSG VIPQQLGTLA RLSAFDVSNN KLSGQIPANL GTRNGNSPRF
201: NSSSFAGNGK LYGYPLGEMK SKGLSVMAIV GIGLGSGVAS LVVSFTGVCI WLKVTEKKME EEEGKISHSM PDY
101: QSLDLSSNQI SGEIPPAIQS LSNLAVLNLS SNRLSGEISP QLARCSFLNV IDLHGNGLSG VIPQQLGTLA RLSAFDVSNN KLSGQIPANL GTRNGNSPRF
201: NSSSFAGNGK LYGYPLGEMK SKGLSVMAIV GIGLGSGVAS LVVSFTGVCI WLKVTEKKME EEEGKISHSM PDY
001: MPVNHRFTFS YRLLFLIFLL SFETAQRLVT GDPNDEACLT NLRQSLEDPA NNLRNWTKSF FINPCSGFSS YLHGVICNNG RIYKLSLTNL SLRGSISPFL
101: SNCTNLQSLD LSSNQISGEI PPQLQFFVNL AVLNLSSNRL SGQISPQIAL CAYLNVIDLH DNQLSGQIPF QFGLLARLTA FDVSNNKLSG QIPSNLAMRN
201: GNLPRFNASS FIGNKKLFGY PLEEMKNKGL SIMAIVGIGL GSGIASLVIS FTGVCIWLKI TEKKMEEEEG KISHSMPVY
101: SNCTNLQSLD LSSNQISGEI PPQLQFFVNL AVLNLSSNRL SGQISPQIAL CAYLNVIDLH DNQLSGQIPF QFGLLARLTA FDVSNNKLSG QIPSNLAMRN
201: GNLPRFNASS FIGNKKLFGY PLEEMKNKGL SIMAIVGIGL GSGIASLVIS FTGVCIWLKI TEKKMEEEEG KISHSMPVY
Arabidopsis Description
ATRLP57Receptor-like protein 57 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH86]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.