Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018344_P001 | Maize | extracellular, plasma membrane | 92.63 | 93.62 |
| Zm00001d052058_P001 | Maize | extracellular, plasma membrane | 91.23 | 92.86 |
| TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 82.11 | 82.39 |
| TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 81.75 | 81.18 |
| HORVU0Hr1G012140.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 81.75 | 81.18 |
| TraesCS5A01G163900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 81.4 | 80.84 |
| Os09t0131200-01 | Rice | plasma membrane | 75.09 | 75.89 |
| Solyc02g092040.1.1 | Tomato | extracellular | 65.26 | 69.66 |
| PGSC0003DMT400093490 | Potato | extracellular | 64.91 | 69.29 |
| GSMUA_Achr3P25790_001 | Banana | extracellular, plasma membrane, vacuole | 67.37 | 68.33 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 65.61 | 68.0 |
| GSMUA_Achr2P08610_001 | Banana | plasma membrane | 66.32 | 67.5 |
| GSMUA_Achr3P30680_001 | Banana | extracellular, plasma membrane | 67.37 | 66.9 |
| GSMUA_Achr7P27510_001 | Banana | extracellular, plasma membrane | 58.95 | 66.67 |
| VIT_07s0151g00470.t01 | Wine grape | plasma membrane | 62.11 | 65.56 |
| KRH28321 | Soybean | extracellular, plasma membrane | 59.65 | 63.2 |
| CDY05959 | Canola | extracellular, plasma membrane | 61.05 | 63.04 |
| AT3G49750.1 | Thale cress | extracellular, plasma membrane | 60.35 | 62.77 |
| Bra029968.1-P | Field mustard | extracellular | 61.4 | 62.72 |
| KRH77166 | Soybean | plasma membrane | 58.6 | 62.31 |
| GSMUA_Achr1P14260_001 | Banana | plastid | 65.96 | 61.84 |
| Bra037831.1-P | Field mustard | extracellular, plasma membrane, vacuole | 58.25 | 60.81 |
| AT5G65830.1 | Thale cress | extracellular, plasma membrane | 56.84 | 58.06 |
| CDX81298 | Canola | extracellular, plasma membrane | 49.47 | 58.02 |
| CDY18672 | Canola | mitochondrion, plasma membrane | 49.12 | 57.61 |
| KXG33866 | Sorghum | cytosol | 29.82 | 34.55 |
| EES19530 | Sorghum | plasma membrane | 34.39 | 16.17 |
| EES11026 | Sorghum | plasma membrane | 35.44 | 16.11 |
| EES09539 | Sorghum | plasma membrane | 33.68 | 15.89 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:8081969 | UniProt:C5XUC6 | EnsemblPlants:EES07661 | ProteinID:EES07661 |
| ProteinID:EES07661.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF13855 |
| PRINTS:PR00019 | PANTHER:PTHR44839 | EnsemblPlantsGene:SORBI_3004G326100 | SUPFAM:SSF52058 | unigene:Sbi.13835 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0001A86262 | RefSeq:XP_002454685.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:66134192..66135049
Molecular Weight (calculated)
29752.8 Da
IEP (calculated)
7.274
GRAVY (calculated)
0.240
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRHHHHHHA AAAAIAAVFF LLTAPPCAAD PNDERCLSHL HQSLYDPSGG LNWTKAAISA PCDGFFSHLQ GVTCNNGRVY KLALPELSLG GTIPPELSNC
101: TNLQSLDLSA NALSGAIPTE LSALLNLAVL NLSANALSGA IPRELASCAY LNVIDLHGNQ LSGPIPDELG LLVRLSTFDV SYNRLSGPIP VLLANRTGAG
201: STAAVGTARF NASSFVGNKG LYGYPLPPLR KRGLSVLAIV GIGLGSGLLS LVLSFSAVCL WLRATDRTAA TPGEEGKISQ LMPDY
101: TNLQSLDLSA NALSGAIPTE LSALLNLAVL NLSANALSGA IPRELASCAY LNVIDLHGNQ LSGPIPDELG LLVRLSTFDV SYNRLSGPIP VLLANRTGAG
201: STAAVGTARF NASSFVGNKG LYGYPLPPLR KRGLSVLAIV GIGLGSGLLS LVLSFSAVCL WLRATDRTAA TPGEEGKISQ LMPDY
001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
Arabidopsis Description
AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.