Factsheet for Bra029968.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G49750.1	Thale cress	extracellular, plasma membrane	88.89	90.51
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	78.14	79.85
VIT_07s0151g00470.t01	Wine grape	plasma membrane	69.89	72.22
PGSC0003DMT400093490	Potato	extracellular	68.82	71.91
Solyc02g092040.1.1	Tomato	extracellular	67.74	70.79
KRH28321	Soybean	extracellular, plasma membrane	64.52	66.91
KRH77166	Soybean	plasma membrane	63.8	66.42
GSMUA_Achr2P08610_001	Banana	plasma membrane	64.52	64.29
GSMUA_Achr3P25790_001	Banana	extracellular, plasma membrane, vacuole	64.16	63.7
GSMUA_AchrUn_...	Banana	plasma membrane	62.72	63.64
GSMUA_Achr3P30680_001	Banana	extracellular, plasma membrane	65.23	63.41
GSMUA_Achr7P27510_001	Banana	extracellular, plasma membrane	56.99	63.1
Zm00001d052058_P001	Maize	extracellular, plasma membrane	61.65	61.43
EES07661	Sorghum	extracellular, plasma membrane	62.72	61.4
Zm00001d018344_P001	Maize	extracellular, plasma membrane	61.29	60.64
TraesCS5B01G161200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	61.65	60.56
TraesCS5D01G168900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	61.65	59.93
TraesCS5A01G163900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	61.29	59.58
HORVU0Hr1G012140.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	61.29	59.58
Os09t0131200-01	Rice	plasma membrane	59.86	59.22
GSMUA_Achr1P14260_001	Banana	plastid	63.44	58.22
Bra001255.1-P	Field mustard	plasma membrane	24.73	26.64
Bra040380.1-P	Field mustard	extracellular	21.15	25.11
Bra006366.1-P	Field mustard	mitochondrion	23.66	20.31
Bra016244.1-P	Field mustard	plasma membrane	34.77	16.28
Bra024650.1-P	Field mustard	plasma membrane	34.77	16.22
Bra033046.1-P	Field mustard	cytosol	31.54	15.33
Bra025334.1-P	Field mustard	plasma membrane	32.62	15.32
Bra020705.1-P	Field mustard	plasma membrane	23.66	11.96
Bra037490.1-P	Field mustard	plastid	15.05	8.97
Bra038824.1-P	Field mustard	cytosol	4.3	3.63

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra029968	EnsemblPlants:Bra029968.1	EnsemblPlants:Bra029968.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4
UniProt:M4EME8	PFAM:PF12799	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44839	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544337	SEG:seg	:	:

Description

AT3G49750 (E=3e-118) AtRLP44 | AtRLP44 (Receptor Like Protein 44); protein binding

Coordinates

chrA01:-:15373232..15374071

Molecular Weight (calculated)

30463.7 Da

IEP (calculated)

8.784

GRAVY (calculated)

0.000

Length

279 amino acids

Sequence
(BLAST)

001: MARSHRFISY RLLLLLLLSF ETARRLASAD PNDEACLKNL RQSLEDPARN LRNWTNNVFS NPCSGFTSYL PGATCNNGRI YKLSLTSLSL RGSISPFLSN
101: CTNLQSLDLS SNQISGDIPP EIQFLVNLAV LNLSSNRLSG EISPQLALCA YLNVIDLHDN QLSGQIPQQL GLLARLSAFD VSNNKLSGQI PTYLSNRTGS
201: FPRFNASSFV GNKGLYGYPL QDMVKGKGLS VMAIVGIGLG SGVVSLMISF TGVCIWLRIT EKKMAAEEEG KISQSMPDY

Best Arabidopsis Sequence Match ( AT3G49750.1 )
(BLAST)

001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY

Arabidopsis Description

AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.