Factsheet for Bra024650.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27190.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G27190.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G27190.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G27190.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G27190.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16228	Canola	plasma membrane	99.83	99.67
CDY14686	Canola	plasma membrane	98.16	98.33
AT1G27190.1	Thale cress	plasma membrane	92.31	91.85
Bra016244.1-P	Field mustard	plasma membrane	73.08	73.32
VIT_01s0026g01060.t01	Wine grape	plasma membrane	66.56	65.14
PGSC0003DMT400058291	Potato	plasma membrane	62.54	60.81
Solyc05g006570.1.1	Tomato	plasma membrane	61.87	60.66
Bra033046.1-P	Field mustard	cytosol	56.19	58.54
Bra025334.1-P	Field mustard	plasma membrane	56.02	56.4
Bra038824.1-P	Field mustard	cytosol	26.42	47.73
Zm00001d016331_P001	Maize	vacuole	17.06	45.54
Bra020705.1-P	Field mustard	plasma membrane	40.64	44.02
Bra037490.1-P	Field mustard	plastid	34.45	44.02
Zm00001d021202_P030	Maize	plastid	26.76	35.09
Bra029968.1-P	Field mustard	extracellular	16.22	34.77
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	15.72	34.43
Bra040380.1-P	Field mustard	extracellular	12.88	32.77
Bra001255.1-P	Field mustard	plasma membrane	14.05	32.43
Zm00001d006033_P032	Maize	plastid	32.61	31.05
Bra006366.1-P	Field mustard	mitochondrion	15.22	28.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra024650	EnsemblPlants:Bra024650.1
EnsemblPlants:Bra024650.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
UniProt:M4E795	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019
PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF4	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254218D	SEG:seg	:

Description

AT1G27190 (E=1e-292) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA09:-:23813552..23815348

Molecular Weight (calculated)

64843.0 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.036

Length

598 amino acids

Sequence
(BLAST)

001: MKTLLPLLFI IISFLSPNAE DDVLCLQGLK NSLTDPSSRL TSWSFPNSSA SSICKLTGVS CWNEKENRII SLQLQSMQLA GQIPESLKLC RSLQSLDLSG
101: NDLSGAIPSQ ICSWLPYLVT LDLSGNKLSG PIPTQIVECK FLNALVLSDN KLSGSVPTEL SRLDRLRRLS LAGNDLSGTI PSELSRFGED DFSDNNGLCG
201: KPLSGCGALS GRNLTIIVVA GVLGAVGSLC VGLAVFWWFF MREGSGRKKR GGYGAGKSRD DSDWIGLLRS HKLVQVTLFQ KPIVKIKLND LMAATNEFSS
301: GNIDVSSRTG VSYKADLPDG SALAVKRLSA CGVGEKQFKS EMSKLGELRH PNLVPLLGYC VVEDERLLVY KHMPNGTLFS QLHSGGLCDA GLDWPTRLMI
401: GVGAARGLAW LHHGCQPPYL HQFISSNVIL LDDDFDARIT DYGLAKLVGT RDSNDSSFNN GDLGELGYVA PEYSSTMVAS LKGDVYGFGI VLLELVTGQK
501: PLSVINGVEG FKGSLVDWVS QYLGTGRSKD AIDRSISGKG HDEEILQFLK IACSCVVSRP KERPTMVQVY ESLKSMADKH GVSEHYDEFP LVFNKQEA

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.