Factsheet for Solyc05g006570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 8
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27190.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT1G27190.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT1G27190.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT1G27190.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT1G27190.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT1G27190.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT1G27190.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT1G27190.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT1G27190.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT1G27190.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058291	Potato	plasma membrane	95.57	94.8
VIT_01s0026g01060.t01	Wine grape	plasma membrane	63.61	63.5
AT1G27190.1	Thale cress	plasma membrane	61.15	62.06
Bra024650.1-P	Field mustard	plasma membrane	60.66	61.87
CDY16228	Canola	plasma membrane	60.66	61.77
AT1G69990.1	Thale cress	plasma membrane	59.67	61.59
CDY14686	Canola	plasma membrane	60.0	61.31
Bra016244.1-P	Field mustard	plasma membrane	57.7	59.06
CDY38780	Canola	plasma membrane	58.03	59.0
CDY11627	Canola	plasma membrane	57.38	58.82
Solyc02g087460.1.1	Tomato	plasma membrane	57.05	57.9
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	56.56	57.21
Solyc11g015910.1.1	Tomato	extracellular	10.66	46.43
Zm00001d016331_P001	Maize	vacuole	16.23	44.2
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	14.26	44.16
Solyc06g082920.2.1	Tomato	plasma membrane	43.11	42.9
Solyc12g096720.1.1	Tomato	cytosol	9.34	40.14
Zm00001d021202_P030	Maize	plastid	25.57	34.21
Solyc02g092040.1.1	Tomato	extracellular	14.26	32.58
Solyc07g006480.2.1	Tomato	plasma membrane	33.11	30.93
Zm00001d006033_P032	Maize	plastid	31.15	30.25
Solyc12g096710.1.1	Tomato	plasma membrane	36.07	27.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K4BWI3
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF4	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g006570.1	EnsemblPlants:Solyc05g006570.1.1	TMHMM:TMhelix	UniParc:UPI000276566C	SEG:seg

Description

No Description!

Coordinates

chr5:+:1207083..1208915

Molecular Weight (calculated)

66993.1 Da

IEP (calculated)

7.226

GRAVY (calculated)

-0.032

Length

610 amino acids

Sequence
(BLAST)

001: MTAKSTNPIF FFTLFFLIFT LTPSFSIEND VKCLEGIKSA FSDPLNKLSS WSFSNTSVAS ICKLVGVSCW NEKENRLLSL QLPSMSLSGS LPSSLQFCSS
101: LQSLDLSGNS FSGPIPVQIC SWLPYLVNLD LSSNYFSGSI PPEFINCKFL NTLLLNDNKL TGSIPFEIGR LDRLKRFSAS NNGLSGSIPD DLDRFSKDDF
201: DGNDGLCGNP IGSKCSNLSN KNLVIIISAG VFGAAASLIL GFGIWRWFLV QPSKKDREFG DGKGVGGGGI NDYWIDKLRA YKLVQVTLFQ KPINKIKLND
301: LLVATNSFAS ENIVVSIRTG VSYRAMLIDG SALAIKRLSS CKLSEKQFRS EMNRLGQLRH PNLVPLLGFC IVDTERLLVY KHMQNGSLNS ILHGNLSTGS
401: SELGWLARVR VAAGAARGLA WLHHGCQPPY VHQYLSSNVI LVDDDYDARI TDFGLARLIG STDSNDSLFV NGDLGEFGYV PPEYSSTLVA SMKGDVYSFG
501: VVLLELVTGR KPVGAEEGFK GSLVDWVNQL SSSGHSKDAI DKSFAGSGRD DEILRVLQIA CLCVVSRPKD RPSMYTVYQS LKSMVKDHCF SEHFDEFPIN
601: LTKENHDHKD

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.