Factsheet for Solyc02g067560.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28450.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT3G28450.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT3G28450.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT3G28450.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT3G28450.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT3G28450.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT3G28450.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT3G28450.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT3G28450.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT3G28450.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT3G28450.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT3G28450.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT3G28450.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT3G28450.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT3G28450.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT3G28450.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT3G28450.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017876	Potato	plasma membrane	95.52	94.12
Solyc02g087460.1.1	Tomato	plasma membrane	74.96	75.21
VIT_14s0066g02250.t01	Wine grape	plasma membrane	67.16	66.07
AT3G28450.1	Thale cress	plasma membrane	63.68	63.47
Bra033046.1-P	Field mustard	cytosol	60.03	63.07
CDX85198	Canola	golgi, plasma membrane	39.47	62.63
CDY04020	Canola	plasma membrane	61.53	61.63
Bra025334.1-P	Field mustard	plasma membrane	59.87	60.77
CDY47244	Canola	plasma membrane	60.36	60.57
CDX86433	Canola	plasma membrane	55.56	59.82
Solyc05g006570.1.1	Tomato	plasma membrane	57.21	56.56
KRG93454	Soybean	mitochondrion	35.99	54.94
KRH18545	Soybean	plasma membrane	25.04	51.36
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	16.75	51.27
Solyc11g015910.1.1	Tomato	extracellular	11.44	49.29
KRH18546	Soybean	extracellular	18.08	46.58
Solyc06g082920.2.1	Tomato	plasma membrane	43.78	43.07
Zm00001d016331_P001	Maize	vacuole	15.26	41.07
Solyc12g096720.1.1	Tomato	cytosol	8.96	38.03
CDX85197	Canola	plastid	13.6	36.94
Zm00001d021202_P030	Maize	plastid	25.54	33.77
Solyc02g092040.1.1	Tomato	extracellular	14.76	33.33
Solyc07g006480.2.1	Tomato	plasma membrane	33.17	30.63
Zm00001d006033_P032	Maize	plastid	31.34	30.1
Solyc12g096710.1.1	Tomato	plasma membrane	35.66	26.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	UniProt:K4B788	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR44101
PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g067560.1
EnsemblPlants:Solyc02g067560.1.1	TMHMM:TMhelix	UniParc:UPI0002767581	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:37708871..37710682

Molecular Weight (calculated)

66825.9 Da

IEP (calculated)

8.269

GRAVY (calculated)

-0.027

Length

603 amino acids

Sequence
(BLAST)

001: MNLFRLINLP FIVLFLVFQP LLHCTAVAVA EDDIKCLEGV KNSLTDPKGN LNSWNFANST VGFICKFVGA SCWNDRENRL INLELRDMNL GGNVTDSLKY
101: CRSLQTLDLS GNQISGSIPS DICTWLPFLV TLDLSYNEFT GSIPSDLVSC SYLNKLMLND NKLSGNIPPQ FSSLGRLKIF SVANNDLSGR IPEAFDSADS
201: FDFGGNDGLC GGPLGKCGRL SKKNLAIIIA AGVFGAAASL LLGFGAWYWY FTKAGKRRKM GYGLGRVDSE RWADKLRAHR LTQVTLFKKP LVKVKLADLM
301: AATNNFSSST VINSTRTGTT FRAVLRDGSA LAIKRLKAYK LSEKLFRMEM NGLGQVRHPN LVPLLGFCVV EEEKLLVYKH LSNGTLYSLL KGNTSMLDWP
401: TRFKIGLGAA RGLAWLHHGC QPPILHQNIC SNVIFLDEDF DARIMDFGLA RLVTPPDAKE TSFVNGELGE FGYVAPEMVA SLKGDAYSFG VVLLELATGQ
501: KPLEITAADE VFKGNLVDWV NQLSVSGQIK DAIDKHICRK GHDEEIVKFL KIACNCLISR PKERWSMYQV YEALKSMAEK HGFSEHYDEF PLLFNKQETS
601: SPI

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.