Factsheet for Bra033046.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28450.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G28450.1	Bra000214.1-P	AT2G41100.1	17360592
AT3G28450.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G28450.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G28450.1	Bra039723.1-P	AT4G14640.1	17360592
AT3G28450.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G28450.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47244	Canola	plasma membrane	98.95	94.51
AT3G28450.1	Thale cress	plasma membrane	83.8	79.5
Bra025334.1-P	Field mustard	plasma membrane	81.88	79.12
VIT_14s0066g02250.t01	Wine grape	plasma membrane	64.81	60.69
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	63.07	60.03
PGSC0003DMT400017876	Potato	plasma membrane	63.76	59.8
Solyc02g087460.1.1	Tomato	plasma membrane	61.85	59.07
PGSC0003DMT400003278	Potato	plasma membrane	61.85	59.07
Bra024650.1-P	Field mustard	plasma membrane	58.54	56.19
KRG93454	Soybean	mitochondrion	37.63	54.68
Bra016244.1-P	Field mustard	plasma membrane	54.53	52.52
KRH18545	Soybean	plasma membrane	24.56	47.96
Bra038824.1-P	Field mustard	cytosol	26.83	46.53
Bra037490.1-P	Field mustard	plastid	36.41	44.66
KRH18546	Soybean	extracellular	17.94	44.02
Bra020705.1-P	Field mustard	plasma membrane	41.29	42.93
Zm00001d016331_P001	Maize	vacuole	15.51	39.73
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	16.2	34.07
Bra001255.1-P	Field mustard	plasma membrane	14.46	32.05
Zm00001d021202_P030	Maize	plastid	25.26	31.8
Bra029968.1-P	Field mustard	extracellular	15.33	31.54
Bra040380.1-P	Field mustard	extracellular	12.37	30.21
Bra006366.1-P	Field mustard	mitochondrion	15.85	28.0
Zm00001d006033_P032	Maize	plastid	30.49	27.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra033046	EnsemblPlants:Bra033046.1
EnsemblPlants:Bra033046.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M4EW62
PFAM:PF07714	PFAM:PF08263	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF2
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0002547033
SEG:seg	:	:	:	:	:

Description

AT3G28450 (E=2e-267) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA02:-:21669420..21671144

Molecular Weight (calculated)

63491.3 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.085

Length

574 amino acids

Sequence
(BLAST)

001: MAADEDDIRC LKGIQTSLTD PQGALRSWNF ANTTLGFLCN FVGVSCWNNQ ENRVINLELR DMGLSGRIPE SLQYCGSLQK LDLSTNRLSG NIPPQLCTWL
101: PFLVSLDLSN NDLNGEVPPS LAECRFVNSL VLSKNRLTGQ IPVQLSSLGR LATFSVSDND LTGRIPSFFA SSAKYSSDDF AGNKRLCGRP LSSTCGGLSK
201: KNLAIIVAAG VIGAAASTLL AFGVWWYYYR TRKRRTLNEE GVSTLARRLI SHKLVQVSLF QKPLVKVKLG DLMAATNGFS SENVIVTTRT GTTYKAVLPD
301: GSALAVKHLS ECKLGEKEFR YEMNRLWELR HPNLAPLLGF CVVEEERLLV YKYMSNGTLM SLLEGDEELD WLTRFRIGLG AARGLAWLHH GCRPSILHQN
401: ICSSVILVDE DFDARIVDSG LARLMVPLDN NESSFMTGDL GEFGYVAPEY STTMLASLKG DVYGLGVVLL ELATGVKALG KEGFKGSLVD WVKHLESSGR
501: LVDVIDEEIK GKGCDEEIIK FVEVACNCVA SRPKERWSMF KAYQSLRAMA EKQGYSFTEQ DEDFPLIFNT QENE

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.