CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28450.1	KRG89812	AT2G41090.1	17360592
AT3G28450.1	KRG94975	AT2G41090.1	17360592
AT3G28450.1	KRH18664	AT2G41090.1	17360592
AT3G28450.1	KRG89812	AT2G41100.1	17360592
AT3G28450.1	KRG94975	AT2G41100.1	17360592
AT3G28450.1	KRH18664	AT2G41100.1	17360592
AT3G28450.1	KRH31638	AT4G14640.1	17360592
AT3G28450.1	KRH69070	AT4G14640.1	17360592
AT3G28450.1	KRG89812	AT5G21274.1	17360592
AT3G28450.1	KRG94975	AT5G21274.1	17360592
AT3G28450.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18545	Soybean	plasma membrane	66.24	52.72
KRG93454	Soybean	mitochondrion	68.8	40.76
KRH66279	Soybean	cytosol	23.08	29.51
CDX85197	Canola	plastid	26.5	27.93
KRH28321	Soybean	extracellular, plasma membrane	29.06	25.28
KRH77166	Soybean	plasma membrane	28.21	24.63
CDX86433	Canola	plasma membrane	45.73	19.11
AT3G28450.1	Thale cress	plasma membrane	49.15	19.01
VIT_14s0066g02250.t01	Wine grape	plasma membrane	49.15	18.76
CDY04020	Canola	plasma membrane	47.44	18.44
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	46.58	18.08
Bra025334.1-P	Field mustard	plasma membrane	45.73	18.01
Bra033046.1-P	Field mustard	cytosol	44.02	17.94
PGSC0003DMT400017876	Potato	plasma membrane	46.58	17.81
CDY47244	Canola	plasma membrane	45.3	17.64
PGSC0003DMT400003278	Potato	plasma membrane	43.59	16.97
Solyc02g087460.1.1	Tomato	plasma membrane	43.59	16.97
KRH66278	Soybean	cytosol	31.62	16.12
KRH21657	Soybean	cytosol	28.63	15.84
KRH07291	Soybean	plasma membrane	37.18	14.17
KRH42002	Soybean	plasma membrane	35.9	13.31
KRH40243	Soybean	plasma membrane	35.04	13.29
KRH41999	Soybean	cytosol, golgi, plasma membrane	34.62	13.17
KRH00983	Soybean	nucleus, plasma membrane	34.62	13.11
KRH66274	Soybean	plasma membrane	10.26	5.32
KRH66277	Soybean	plasma membrane	10.26	5.32
CDX85198	Canola	golgi, plasma membrane	3.42	2.11
KRH42000	Soybean	vacuole	2.99	1.81
Zm00001d006033_P032	Maize	plastid	4.27	1.59
KRH49900	Soybean	cytosol	0.0	0.0
KRH66275	Soybean	mitochondrion, plasma membrane	0.0	0.0
KRH37646	Soybean	cytosol	0.0	0.0
KRH21660	Soybean	cytosol	0.0	0.0
KRH21659	Soybean	cytosol	0.0	0.0
KRG88547	Soybean	cytosol	0.0	0.0
Zm00001d016331_P001	Maize	vacuole	0.0	0.0
Zm00001d021202_P030	Maize	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02008091	EnsemblPlants:KRH18546	EnsemblPlantsGene:GLYMA_13G067200	EntrezGene:102666152	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	PFAM:PF13855	ProteinID:KRH18546	ProteinID:KRH18546.1	SignalP:SignalP-noTM
SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI00023D0144	UniProt:K7LXE2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr13:-:16688567..16689544

Molecular Weight (calculated)

26087.2 Da

IEP (calculated)

6.503

GRAVY (calculated)

-0.082

Length

234 amino acids

Sequence
(BLAST)

001: MNPRSSLCSS LFMFITLLGL HVYFASSQVE DYVRCLRGIE DTVSDPQARL ATWRFDNTTS GFICDFEGVS CWGRRENRVL GLDLRDTKLS GNKIPEALKY
101: CGKSIQRLDL ASDSFTSKIP REICTWMPFL VSIDLSSNKL SGHIPPTIVN CSYLNELVLS NNQLSGSIPS EFGSLNRLKK FSVANNRLSG TIPEIFNGFD
201: REGFEGNSKK NDIIIVAAGG WLVWEAAWEG VINL

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.