CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88547	Soybean	cytosol	49.67	93.85
KRH66274	Soybean	plasma membrane	67.1	91.35
KRH66277	Soybean	plasma membrane	66.94	91.13
KRH66278	Soybean	cytosol	64.33	86.06
KRH66275	Soybean	mitochondrion, plasma membrane	33.88	83.53
KRH37646	Soybean	cytosol	31.92	80.33
KRH00983	Soybean	nucleus, plasma membrane	77.69	77.18
KRH40243	Soybean	plasma membrane	76.22	75.85
Bra038824.1-P	Field mustard	cytosol	39.09	72.51
VIT_00s2085g00010.t01	Wine grape	plasma membrane	72.48	71.89
PGSC0003DMT400071183	Potato	plasma membrane	66.12	66.23
Solyc06g082920.2.1	Tomato	plasma membrane	65.15	65.25
Bra037490.1-P	Field mustard	plastid	49.02	64.32
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	48.37	63.46
Bra020705.1-P	Field mustard	plasma membrane	56.35	62.68
CDY48749	Canola	plasma membrane	61.24	60.35
AT5G48380.1	Thale cress	plasma membrane	60.75	60.16
CDX85334	Canola	plasma membrane	60.91	60.03
CDY05685	Canola	plasma membrane	60.91	59.84
KRH66279	Soybean	cytosol	17.59	59.02
CDX69430	Canola	extracellular	16.61	42.68
KRH41999	Soybean	cytosol, golgi, plasma membrane	42.35	42.28
KRG93454	Soybean	mitochondrion	26.55	41.27
CDY38095	Canola	plasma membrane	17.75	41.13
CDX85492	Canola	plasma membrane	17.75	40.67
KRH42002	Soybean	plasma membrane	41.69	40.57
KRH21657	Soybean	cytosol	27.69	40.19
CDY38092	Canola	plasma membrane	17.43	39.93
Bra040380.1-P	Field mustard	extracellular	14.5	37.87
CDY16992	Canola	cytosol, plasma membrane, plastid	12.38	37.81
KRH18546	Soybean	extracellular	14.17	37.18
KRH49900	Soybean	cytosol	15.15	36.47
KRH18545	Soybean	plasma membrane	17.26	36.05
CDY07991	Canola	plasma membrane	14.66	34.75
KRH21659	Soybean	cytosol	13.36	34.75
Bra001255.1-P	Field mustard	plasma membrane	14.33	33.98
Bra006366.1-P	Field mustard	mitochondrion	16.94	32.0
KRH77166	Soybean	plasma membrane	13.68	31.34
KRH28321	Soybean	extracellular, plasma membrane	13.68	31.23
CDX70708	Canola	extracellular, plasma membrane, vacuole	18.08	31.01
KRH42000	Soybean	vacuole	18.89	30.05
KRH21660	Soybean	cytosol	6.68	25.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100305365	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02009953
EnsemblPlantsGene:GLYMA_16G079200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K7MFU0	EnsemblPlants:KRH07291	ProteinID:KRH07291
ProteinID:KRH07291.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR44101
PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000295A629	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:8183660..8187220

Molecular Weight (calculated)

67866.8 Da

IEP (calculated)

7.654

GRAVY (calculated)

-0.122

Length

614 amino acids

Sequence
(BLAST)

001: MVLHSWISSS HILVNFLLLL GCGITYGTDT DIFCLKSIKE SLEDPYNYLK FSWDFNNKTE GYICRFNGVE CWHPDENRVL NLKLSNMGLK GQFPRGIQNC
101: SSLTGLDLSI NKLSGTIPGD ISTLIPFATS IDLSTNEFSG AIPVSLANCT FLNTLKLDQN RLTGQIPPQF GVLSRIKVFS VSNNLLTGQV PIFRDGVELH
201: YANNQGLCGG NTLAPCQATP SKSNMAVIAG AAAGGVTLAA LGLGIGMFFF VRRVSFKKKE EDPEGNKWAR SLKGTKRIKV SMFEKSISKM KLSDLMKATN
301: NFSNTNIIGT GRTGTVYKAV LDDGTTLMVK RLQESQYTEK EFMSEMGTLG TVKHRNLVPL LGFCMTKRER LLVYKNMPNG NLHDQLHPAD GVSTLDWTTR
401: LKIAIGAAKG LAWLHHSCNP RIIHRNISSK CILLDADFEP KISDFGLARL MNPIDTHLST FVNGEFGDLG YVAPEYTRTL VATPKGDIYS FGTVLLELVT
501: GERPTNVSKA PETFKGNLVE WITELTSNAK LHDAIDESLV RKDVDSELFQ FLKVACNCVS PTPKERPTMF EVYQLLRAIG GRYNFTTEDD ILVPTDIGNT
601: DNMQELIVAQ EGSY

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.