Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48380.1 | KRG91762 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | KRH35013 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | KRH70218 | AT1G71830.1 | 19616764 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38095 | Canola | plasma membrane | 37.7 | 26.04 |
| CDX85492 | Canola | plasma membrane | 37.16 | 25.37 |
| CDY38092 | Canola | plasma membrane | 36.61 | 25.0 |
| CDX69430 | Canola | extracellular | 32.24 | 24.69 |
| Bra001255.1-P | Field mustard | plasma membrane | 33.88 | 23.94 |
| CDY07991 | Canola | plasma membrane | 33.88 | 23.94 |
| Bra040380.1-P | Field mustard | extracellular | 30.6 | 23.83 |
| KRH28321 | Soybean | extracellular, plasma membrane | 34.97 | 23.79 |
| KRH77166 | Soybean | plasma membrane | 34.43 | 23.51 |
| KRH18546 | Soybean | extracellular | 29.51 | 23.08 |
| KRH18545 | Soybean | plasma membrane | 35.52 | 22.11 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 24.04 | 21.89 |
| Bra006366.1-P | Field mustard | mitochondrion | 38.8 | 21.85 |
| CDX70708 | Canola | extracellular, plasma membrane, vacuole | 39.89 | 20.39 |
| KRH66278 | Soybean | cytosol | 50.82 | 20.26 |
| KRH07291 | Soybean | plasma membrane | 59.02 | 17.59 |
| KRG93454 | Soybean | mitochondrion | 37.7 | 17.47 |
| KRH21657 | Soybean | cytosol | 37.7 | 16.31 |
| KRH40243 | Soybean | plasma membrane | 54.64 | 16.21 |
| KRH00983 | Soybean | nucleus, plasma membrane | 52.46 | 15.53 |
| KRH41999 | Soybean | cytosol, golgi, plasma membrane | 48.63 | 14.47 |
| KRH42002 | Soybean | plasma membrane | 48.63 | 14.1 |
| CDX85334 | Canola | plasma membrane | 40.98 | 12.04 |
| AT5G48380.1 | Thale cress | plasma membrane | 40.44 | 11.94 |
| CDY48749 | Canola | plasma membrane | 39.89 | 11.72 |
| CDY05685 | Canola | plasma membrane | 39.34 | 11.52 |
| Bra020705.1-P | Field mustard | plasma membrane | 33.33 | 11.05 |
| KRH66274 | Soybean | plasma membrane | 18.03 | 7.32 |
| KRH66277 | Soybean | plasma membrane | 18.03 | 7.32 |
| Bra037490.1-P | Field mustard | plastid | 15.85 | 6.2 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 14.75 | 5.77 |
| KRH42000 | Soybean | vacuole | 6.01 | 2.85 |
| KRH37646 | Soybean | cytosol | 2.19 | 1.64 |
| KRH21660 | Soybean | cytosol | 1.09 | 1.26 |
| KRG88547 | Soybean | cytosol | 2.19 | 1.23 |
| Bra038824.1-P | Field mustard | cytosol | 2.19 | 1.21 |
| KRH66275 | Soybean | mitochondrion, plasma membrane | 1.09 | 0.8 |
| KRH49900 | Soybean | cytosol | 1.09 | 0.78 |
| KRH21659 | Soybean | cytosol | 0.55 | 0.42 |
Protein Annotations
| EMBL:ACUP02001936 | EnsemblPlants:KRH66279 | EnsemblPlantsGene:GLYMA_03G096200 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR44101 | PANTHER:PTHR44101:SF5 | ProteinID:KRH66279 | ProteinID:KRH66279.1 | SUPFAM:SSF52058 | UniParc:UPI0006EDDC81 |
| UniProt:A0A0R0KGT8 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:28334611..28335472
Molecular Weight (calculated)
20098.0 Da
IEP (calculated)
8.212
GRAVY (calculated)
-0.184
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNDIFCLKS IKESLRDPYN YLQSWNFNNK MKALFVSLMG LNVGTLMRTE ANFLVIQNCT SLTGLDFSIN TLSGTIPENT ATLLPFVTSL DQSSNKFSGA
101: IPMSLANCTD LNALKLDQNR LSYHFPQQLG LLQRPRTFTV SNNSLTGPVP NFTNGHVVVN YSNNEGLCGP SLRPCPNNSS TGH
101: IPMSLANCTD LNALKLDQNR LSYHFPQQLG LLQRPRTFTV SNNSLTGPVP NFTNGHVVVN YSNNEGLCGP SLRPCPNNSS TGH
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
Arabidopsis Description
BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.