CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88547	Soybean	cytosol	71.84	99.69
KRH66274	Soybean	plasma membrane	98.89	98.89
KRH66275	Soybean	mitochondrion, plasma membrane	47.23	85.54
KRH37646	Soybean	cytosol	41.91	77.46
Bra038824.1-P	Field mustard	cytosol	51.22	69.79
KRH07291	Soybean	plasma membrane	91.13	66.94
KRH66278	Soybean	cytosol	64.75	63.62
Bra037490.1-P	Field mustard	plastid	63.41	61.11
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	62.31	60.04
KRH00983	Soybean	nucleus, plasma membrane	77.61	56.63
KRH40243	Soybean	plasma membrane	76.72	56.08
VIT_00s2085g00010.t01	Wine grape	plasma membrane	74.06	53.96
Bra020705.1-P	Field mustard	plasma membrane	62.97	51.45
PGSC0003DMT400071183	Potato	plasma membrane	68.29	50.24
Solyc06g082920.2.1	Tomato	plasma membrane	66.74	49.1
AT5G48380.1	Thale cress	plasma membrane	62.97	45.81
CDY48749	Canola	plasma membrane	63.19	45.75
CDY05685	Canola	plasma membrane	62.53	45.12
CDX85334	Canola	plasma membrane	62.31	45.1
KRH49900	Soybean	cytosol	19.73	34.9
KRH21659	Soybean	cytosol	17.96	34.32
KRH42000	Soybean	vacuole	23.06	26.94
KRH41999	Soybean	cytosol, golgi, plasma membrane	35.48	26.02
KRH21660	Soybean	cytosol	9.09	25.79
KRH42002	Soybean	plasma membrane	35.92	25.67
KRH21657	Soybean	cytosol	22.84	24.35
KRG93454	Soybean	mitochondrion	20.84	23.8
KRH66279	Soybean	cytosol	7.32	18.03
CDY16992	Canola	cytosol, plasma membrane, plastid	7.54	16.92
CDX69430	Canola	extracellular	7.98	15.06
KRH18545	Soybean	plasma membrane	9.31	14.29
CDY38095	Canola	plasma membrane	7.76	13.21
CDX85492	Canola	plasma membrane	7.76	13.06
CDY38092	Canola	plasma membrane	7.76	13.06
KRH77166	Soybean	plasma membrane	7.54	12.69
KRH28321	Soybean	extracellular, plasma membrane	7.54	12.64
KRH18546	Soybean	extracellular	5.32	10.26
Bra006366.1-P	Field mustard	mitochondrion	6.43	8.92
CDY07991	Canola	plasma membrane	5.1	8.88
Bra001255.1-P	Field mustard	plasma membrane	4.88	8.49
CDX70708	Canola	extracellular, plasma membrane, vacuole	6.43	8.1
Bra040380.1-P	Field mustard	extracellular	3.99	7.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A0R0KP96	EMBL:ACUP02001935
EnsemblPlantsGene:GLYMA_03G096000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	EnsemblPlants:KRH66277	ProteinID:KRH66277	ProteinID:KRH66277.1	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0006EE075A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:28318199..28320012

Molecular Weight (calculated)

49795.2 Da

IEP (calculated)

8.146

GRAVY (calculated)

-0.148

Length

451 amino acids

Sequence
(BLAST)

001: GQIPPQFGVL SRIKTFYVSN NLLMGPVPIF SVGVSKNYAN NQGLCGGKTL APCQTKSSKS NLAVIAGAAA GGVTLVALGL CIGLFFFVRH VSFKKKEEDP
101: EGNKWARSLK GTKQIKVSMF EKSIPKMKLS DIMKATNNFS NTNMIGTGRT GTVYKAVLDD GTTLMVKRLQ ESQYTEKQFM SEMGTLGTVK HRNLVPLLGF
201: CMAKRERLLV YKNMPNGSLH DQLHPADGVS TLDWTTRLKI AIGAAKGLAW LHHSCNPCII HRNISSKCML LDADFEPKIS DFGLARLMNP IDTHLSTFVN
301: GEFGDLGYVA PEYTRTLVAT TKGDIYSFGT VLLELVTGER PTNVYKAPET FKGNLVEWIT ELTSNAEHHD AIDESLVSKD ADSELFQFLK VVCNCVSPTP
401: KERPTMFEVY QLLRAIGGRY NFTTEDEILV PTDIGDTDKM EEFIVAREGS Y

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.