Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 3
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48380.1 | CDX68299 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDX72833 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDX96350 | AT1G71830.1 | 19616764 |
| AT5G48380.1 | CDY36679 | AT1G71830.1 | 19616764 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85492 | Canola | plasma membrane | 97.74 | 96.64 |
| CDY38092 | Canola | plasma membrane | 95.85 | 94.78 |
| CDX69430 | Canola | extracellular | 66.79 | 74.06 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 52.83 | 69.65 |
| CDX70708 | Canola | extracellular, plasma membrane, vacuole | 69.81 | 51.68 |
| TraesCS3D01G395600.1 | Wheat | endoplasmic reticulum, vacuole | 39.25 | 47.71 |
| CDY07991 | Canola | plasma membrane | 45.66 | 46.72 |
| Os01t0892300-01 | Rice | extracellular, golgi, plasma membrane | 47.17 | 44.8 |
| TraesCS3A01G401300.1 | Wheat | cytosol | 40.38 | 44.58 |
| TraesCS3D01G395900.1 | Wheat | extracellular, golgi, plasma membrane | 41.89 | 43.87 |
| TraesCS3D01G395700.1 | Wheat | plasma membrane | 44.15 | 43.49 |
| TraesCS3D01G395400.1 | Wheat | extracellular, golgi, plasma membrane | 39.25 | 42.45 |
| TraesCS3A01G400700.1 | Wheat | extracellular, plasma membrane | 42.64 | 42.32 |
| TraesCS3A01G400800.1 | Wheat | extracellular | 42.26 | 42.11 |
| TraesCS3A01G401200.1 | Wheat | plasma membrane | 42.64 | 41.85 |
| TraesCS3D01G396100.1 | Wheat | plasma membrane | 41.51 | 41.35 |
| KXG33866 | Sorghum | cytosol | 38.11 | 41.06 |
| TraesCS3B01G434200.1 | Wheat | plasma membrane | 42.26 | 41.03 |
| TraesCS3B01G433700.1 | Wheat | plasma membrane | 40.75 | 40.91 |
| TraesCS3D01G395100.1 | Wheat | extracellular, plasma membrane | 40.0 | 40.61 |
| TraesCS3B01G434100.1 | Wheat | plasma membrane | 41.13 | 40.37 |
| TraesCS7A01G410600.1 | Wheat | extracellular | 39.62 | 40.08 |
| TraesCS3B01G434000.1 | Wheat | plasma membrane | 38.87 | 39.46 |
| KRH66279 | Soybean | cytosol | 26.04 | 37.7 |
| TraesCS3A01G401100.1 | Wheat | extracellular, plasma membrane | 40.75 | 37.63 |
| HORVU3Hr1G090040.1 | Barley | extracellular, plasma membrane | 35.47 | 37.6 |
| Os01t0891601-01 | Rice | extracellular, golgi, plasma membrane | 36.6 | 37.6 |
| TraesCS3A01G401000.1 | Wheat | cytosol | 24.15 | 37.21 |
| Zm00001d039672_P001 | Maize | plasma membrane | 34.72 | 35.94 |
| TraesCS3A01G400900.1 | Wheat | extracellular, plasma membrane | 38.49 | 35.66 |
| TraesCS3B01G433800.1 | Wheat | extracellular | 30.19 | 35.56 |
| TraesCS3B01G433900.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 39.62 | 33.98 |
| TraesCS3D01G395800.1 | Wheat | plastid | 43.4 | 32.39 |
| Os01t0891700-01 | Rice | plasma membrane | 36.6 | 31.7 |
| PGSC0003DMT400070667 | Potato | cytosol | 26.04 | 31.22 |
| CDX85197 | Canola | plastid | 23.4 | 27.93 |
| VIT_05s0094g01290.t01 | Wine grape | mitochondrion | 13.21 | 27.34 |
| CDX81298 | Canola | extracellular, plasma membrane | 24.15 | 26.34 |
| CDY18672 | Canola | mitochondrion, plasma membrane | 24.15 | 26.34 |
| CDY05959 | Canola | extracellular, plasma membrane | 26.42 | 25.36 |
| CDY48749 | Canola | plasma membrane | 55.09 | 23.43 |
| CDY05685 | Canola | plasma membrane | 54.72 | 23.2 |
| CDX85334 | Canola | plasma membrane | 53.58 | 22.79 |
| AT5G48380.1 | Thale cress | plasma membrane | 52.08 | 22.26 |
| KRH66278 | Soybean | cytosol | 36.6 | 21.13 |
| KRH21657 | Soybean | cytosol | 32.83 | 20.57 |
| Os05t0414700-01 | Rice | plasma membrane | 45.28 | 19.77 |
| PGSC0003DMT400070664 | Potato | cytosol, plasma membrane, plastid | 27.17 | 19.51 |
| TraesCS1B01G269900.1 | Wheat | plasma membrane | 44.53 | 19.5 |
| EES19530 | Sorghum | plasma membrane | 43.77 | 19.14 |
| PGSC0003DMT400075494 | Potato | plasma membrane | 41.89 | 19.07 |
| PGSC0003DMT400075495 | Potato | plasma membrane | 41.89 | 18.88 |
| HORVU1Hr1G064780.1 | Barley | plasma membrane | 42.64 | 18.71 |
| KRH40243 | Soybean | plasma membrane | 43.4 | 18.64 |
| Zm00001d038195_P001 | Maize | plasma membrane | 44.15 | 18.57 |
| CDX86433 | Canola | plasma membrane | 39.25 | 18.57 |
| TraesCS1A01G259600.1 | Wheat | plasma membrane | 42.26 | 18.51 |
| Zm00001d007277_P001 | Maize | plasma membrane | 40.38 | 18.23 |
| TraesCS1D01G259400.1 | Wheat | plasma membrane | 41.51 | 18.21 |
| VIT_00s0220g00120.t01 | Wine grape | plasma membrane | 42.64 | 18.2 |
| KRH00983 | Soybean | nucleus, plasma membrane | 41.89 | 17.96 |
| PGSC0003DMT400071183 | Potato | plasma membrane | 41.51 | 17.94 |
| VIT_00s2085g00010.t01 | Wine grape | plasma membrane | 41.89 | 17.93 |
| EES09539 | Sorghum | plasma membrane | 40.75 | 17.88 |
| KRH07291 | Soybean | plasma membrane | 41.13 | 17.75 |
| PGSC0003DMT400070657 | Potato | peroxisome, plasma membrane, plastid | 26.42 | 17.46 |
| Solyc06g082920.2.1 | Tomato | plasma membrane | 40.0 | 17.29 |
| CDY04020 | Canola | plasma membrane | 38.49 | 16.94 |
| CDY47244 | Canola | plasma membrane | 38.11 | 16.81 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 25.28 | 16.71 |
| CDY38780 | Canola | plasma membrane | 37.74 | 16.67 |
| CDY11627 | Canola | plasma membrane | 36.6 | 16.3 |
| TraesCS4B01G086300.1 | Wheat | plasma membrane | 36.98 | 16.17 |
| TraesCS4D01G084000.1 | Wheat | plasma membrane | 36.98 | 16.17 |
| HORVU4Hr1G014760.3 | Barley | plasma membrane | 36.98 | 16.17 |
| CDY14686 | Canola | plasma membrane | 36.23 | 16.08 |
| CDY16228 | Canola | plasma membrane | 36.23 | 16.03 |
| TraesCS4A01G229800.1 | Wheat | plasma membrane | 36.23 | 15.84 |
| KRH41999 | Soybean | cytosol, golgi, plasma membrane | 35.85 | 15.45 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 37.36 | 15.16 |
| KRH42002 | Soybean | plasma membrane | 35.47 | 14.9 |
| Solyc12g096710.1.1 | Tomato | plasma membrane | 41.13 | 13.51 |
| Os11t0249900-01 | Rice | plasma membrane | 24.91 | 13.17 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 19.62 | 11.11 |
| PGSC0003DMT400070666 | Potato | plastid | 18.49 | 10.52 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 15.85 | 10.05 |
| KRH66274 | Soybean | plasma membrane | 13.21 | 7.76 |
| KRH66277 | Soybean | plasma membrane | 13.21 | 7.76 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 4.15 | 4.68 |
| Solyc12g096720.1.1 | Tomato | cytosol | 2.26 | 4.23 |
| KRH66275 | Soybean | mitochondrion, plasma membrane | 3.77 | 4.02 |
| KRH42000 | Soybean | vacuole | 5.66 | 3.89 |
| KRG88547 | Soybean | cytosol | 4.53 | 3.69 |
| KRH37646 | Soybean | cytosol | 3.4 | 3.69 |
| CDX85198 | Canola | golgi, plasma membrane | 5.28 | 3.68 |
| KRH21659 | Soybean | cytosol | 2.26 | 2.54 |
| KRH21660 | Soybean | cytosol | 1.51 | 2.52 |
| PGSC0003DMT400070694 | Potato | cytosol | 1.89 | 2.36 |
| KRH49900 | Soybean | cytosol | 2.26 | 2.35 |
| Os01t0891300-01 | Rice | plasma membrane, plastid | 2.64 | 1.95 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:A0A078HI27 | UniProt:A0A078HI27 | EnsemblPlants:CDY38095 | ProteinID:CDY38095 |
| ProteinID:CDY38095.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00065363001 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | PFAM:PF00560 | PFAM:PF08263 | PANTHER:PTHR44101 | SUPFAM:SSF52058 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EC764E | SEG:seg | : | : | : |
Description
BnaC02g06780DBnaC02g06780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI27]
Coordinates
chrLK032416:-:73230..74027
Molecular Weight (calculated)
29499.3 Da
IEP (calculated)
5.308
GRAVY (calculated)
-0.038
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIIPTCLWF LLVSSFTCAN EADVYCLRDI YSQVKDPNRY LTSWVFGNTT SGYICNFSGV TCWHDDENRV LSIKLSGFGL EGEFPSGIMY CTGLVDLDLS
101: RNNFYGALPS NMASLVPFLT TLDLSYNRFS GEIPASLSNI KFLNILMLQH NQFTGQLPPE LASLPRLYKF SVADNQLTGP IPRFNETTMS IGPENFANNE
201: GLCGRPMDAC VDPEEETIRL GKMGAAVGAA LLAPVGAFLD WFSFNRRKKK QGDTRHRSLI FHIGD
101: RNNFYGALPS NMASLVPFLT TLDLSYNRFS GEIPASLSNI KFLNILMLQH NQFTGQLPPE LASLPRLYKF SVADNQLTGP IPRFNETTMS IGPENFANNE
201: GLCGRPMDAC VDPEEETIRL GKMGAAVGAA LLAPVGAFLD WFSFNRRKKK QGDTRHRSLI FHIGD
001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
Arabidopsis Description
Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.