Factsheet for TraesCS3D01G395100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G433700.1	Wheat	plasma membrane	86.97	85.98
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	73.56	76.8
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	54.41	65.14
TraesCS3D01G395700.1	Wheat	plasma membrane	66.28	64.31
TraesCS3D01G396100.1	Wheat	plasma membrane	65.13	63.91
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	60.92	62.85
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	65.52	61.29
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	57.47	61.22
KXG33866	Sorghum	cytosol	54.41	57.72
TraesCS3D01G395800.1	Wheat	plastid	65.52	48.17
TraesCS2D01G344600.1	Wheat	extracellular	33.72	40.37
CDY38095	Canola	plasma membrane	40.61	40.0
CDX69430	Canola	extracellular	35.63	38.91
CDX85492	Canola	plasma membrane	39.46	38.43
CDY38092	Canola	plasma membrane	39.46	38.43
Bra040380.1-P	Field mustard	extracellular	34.1	37.87
CDY07991	Canola	plasma membrane	37.16	37.45
Bra001255.1-P	Field mustard	plasma membrane	35.63	35.91
CDY16992	Canola	cytosol, plasma membrane, plastid	27.59	35.82
PGSC0003DMT400070667	Potato	cytosol	26.05	30.77
Bra006366.1-P	Field mustard	mitochondrion	38.31	30.77
CDX70708	Canola	extracellular, plasma membrane, vacuole	41.76	30.45
TraesCS5D01G168900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.33	30.31
VIT_05s0094g01290.t01	Wine grape	mitochondrion	12.64	25.78
TraesCS1D01G259400.1	Wheat	plasma membrane	50.19	21.69
PGSC0003DMT400075494	Potato	plasma membrane	41.38	18.56
TraesCS4D01G084000.1	Wheat	plasma membrane	42.15	18.15
PGSC0003DMT400075495	Potato	plasma membrane	40.61	18.03
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	25.29	17.89
CDY48749	Canola	plasma membrane	41.38	17.34
PGSC0003DMT400071183	Potato	plasma membrane	39.46	16.8
VIT_00s0220g00120.t01	Wine grape	plasma membrane	39.85	16.75
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	25.67	16.71
CDY05685	Canola	plasma membrane	39.85	16.64
VIT_00s2085g00010.t01	Wine grape	plasma membrane	39.46	16.64
Solyc06g082920.2.1	Tomato	plasma membrane	39.08	16.64
CDX85334	Canola	plasma membrane	39.08	16.37
AT5G48380.1	Thale cress	plasma membrane	37.93	15.97
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	22.61	14.71
Bra020705.1-P	Field mustard	plasma membrane	30.65	14.49
Solyc07g006480.2.1	Tomato	plasma membrane	36.02	14.4
Solyc12g096710.1.1	Tomato	plasma membrane	41.0	13.26
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	16.86	10.53
PGSC0003DMT400070666	Potato	plastid	17.24	9.66
Bra037490.1-P	Field mustard	plastid	14.94	8.33
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	14.56	8.12
TraesCS2D01G344700.1	Wheat	vacuole	3.07	3.09
GSMUA_Achr6P28640_001	Banana	plastid	2.68	2.98
Solyc12g096720.1.1	Tomato	cytosol	1.53	2.82
Bra038824.1-P	Field mustard	cytosol	2.68	2.11
PGSC0003DMT400070694	Potato	cytosol	1.15	1.42
KRH21660	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3D01G395100.1	EnsemblPlantsGene:TraesCS3D01G395100	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44101
PANTHER:PTHR44101:SF3	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr3D:-:510314182..510314967

Molecular Weight (calculated)

28249.8 Da

IEP (calculated)

7.754

GRAVY (calculated)

0.038

Length

261 amino acids

Sequence
(BLAST)

001: MADDTKFLLW LLLLSSSSLC HGSELDIQCL KSVQKSVADP NGILKSSWKF NKNGRSGYIC GFTGVECWSH DDNRVLTLRL PNLGLQGPFP QGLHDCTSMI
101: ALDLSGNGFS GPIPSRIAHD APHLSYLDLS NNSFSGEIPD GIANMVYLNV LNLEYSRLDG QIPERFNALG RLTTFSVADN LLSGPVPSLL RKFPASHFAG
201: NRGLCGAPLD GCPGKRWGLI TINDQSTVGA AVGFVVGFVA AFYFPHWFGF SGRPRACSLR V

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.