Factsheet for TraesCS4D01G084000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G086300.1	Wheat	plasma membrane	97.19	97.19
HORVU4Hr1G014760.3	Barley	plasma membrane	95.87	95.87
TraesCS4A01G229800.1	Wheat	plasma membrane	95.05	95.05
Os11t0249900-01	Rice	plasma membrane	70.79	85.63
EES09539	Sorghum	plasma membrane	83.5	83.77
Zm00001d007277_P001	Maize	plasma membrane	80.69	83.3
GSMUA_Achr6P28640_001	Banana	plastid	31.35	80.85
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	48.51	73.32
Zm00001d039672_P001	Maize	plasma membrane	30.53	72.27
TraesCS1D01G259400.1	Wheat	plasma membrane	66.17	66.39
Bra038824.1-P	Field mustard	cytosol	35.64	65.26
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	43.89	63.64
VIT_00s0220g00120.t01	Wine grape	plasma membrane	62.38	60.87
Solyc06g082920.2.1	Tomato	plasma membrane	60.56	59.87
PGSC0003DMT400071183	Potato	plasma membrane	60.56	59.87
Bra037490.1-P	Field mustard	plastid	45.54	58.97
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	45.21	58.55
VIT_00s2085g00010.t01	Wine grape	plasma membrane	58.91	57.67
Bra020705.1-P	Field mustard	plasma membrane	51.98	57.07
AT5G48380.1	Thale cress	plasma membrane	57.76	56.45
CDX85334	Canola	plasma membrane	56.44	54.9
CDY48749	Canola	plasma membrane	56.11	54.57
CDY05685	Canola	plasma membrane	55.45	53.76
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	18.65	51.83
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	20.63	49.41
TraesCS3D01G396100.1	Wheat	plasma membrane	20.96	47.74
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	19.14	47.35
TraesCS2D01G344700.1	Wheat	vacuole	20.13	47.1
TraesCS3D01G395700.1	Wheat	plasma membrane	20.63	46.47
Solyc12g096720.1.1	Tomato	cytosol	9.9	42.25
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	18.15	42.15
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	25.08	41.19
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	26.73	40.4
CDX69430	Canola	extracellular	15.68	39.75
PGSC0003DMT400075495	Potato	plasma membrane	38.45	39.63
PGSC0003DMT400070667	Potato	cytosol	14.36	39.37
TraesCS2D01G344600.1	Wheat	extracellular	13.86	38.53
PGSC0003DMT400075494	Potato	plasma membrane	36.14	37.63
CDY38095	Canola	plasma membrane	16.17	36.98
CDY38092	Canola	plasma membrane	16.34	36.94
CDX85492	Canola	plasma membrane	16.17	36.57
CDY16992	Canola	cytosol, plasma membrane, plastid	12.05	36.32
CDY07991	Canola	plasma membrane	15.51	36.29
PGSC0003DMT400070694	Potato	cytosol	12.54	35.85
TraesCS3D01G395800.1	Wheat	plastid	20.96	35.77
PGSC0003DMT400070666	Potato	plastid	27.23	35.41
Bra001255.1-P	Field mustard	plasma membrane	15.02	35.14
Solyc07g006480.2.1	Tomato	plasma membrane	37.79	35.07
Bra040380.1-P	Field mustard	extracellular	13.2	34.04
TraesCS5D01G168900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	15.84	33.45
VIT_05s0094g01290.t01	Wine grape	mitochondrion	6.77	32.03
Solyc12g096710.1.1	Tomato	plasma membrane	38.78	29.12
Bra006366.1-P	Field mustard	mitochondrion	14.85	27.69
CDX70708	Canola	extracellular, plasma membrane, vacuole	16.17	27.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF3	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G084000	EnsemblPlants:TraesCS4D01G084000.1	TIGR:cd12087
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:57835789..57838099

Molecular Weight (calculated)

66124.6 Da

IEP (calculated)

7.227

GRAVY (calculated)

-0.120

Length

606 amino acids

Sequence
(BLAST)

001: MAIRCFYATL VQILLCLMLC QPCYSTVTDI QCLKRLKASV DPNNKLHWTF DDNKEGSICT FNGVECWHPN ENRILSLRLS SMDLKGQFPD GLENCSSMTS
101: LDLSSNSLSG PIPVDISKRL PYITNLDLSY NSFSGEIPES LANCTYLNVV SLQNNKLTGA IPGQFAGLSR LTEFNVANNK LSGQIPPSLS KFSSSNFANQ
201: DLCGKPLSGD CTASSSSRTG VIAGSAVAGA VITLIIVGVI LFIFLRKMPA KKKEKDLEEN KWAKSIXXXX XXXVSMFEKS VSKMKLNDLM KATCDFTKEN
301: IIGTVHSGTM YKATLPDGSF LAIKRLQDTQ HSESQFTSEM STLGSARQRN LVPLLGYCIA KKERLLVYKY MPKGSLYDQL HHEGSDREAL EWPMRLKIAI
401: GAGRGLAWLH HSCNPRILHR NISSKCILLD DDYEPKISDF GLARLMNAID THLSTFVNGE FGDLGYVAPE YTHTLVATPK GDVYSFGVVL LELVTGEEPT
501: RVSKAPENFK GSLVDWITYL SNNSILQDAV DKSLIGKNSD AELLQVLKVA CSCVLSAPKE RPTMFEVYQL LRAVGEKYHF SAADDELALR PQDADSKKLD
601: ELIVAK

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.