Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G186900.2 | Wheat | plasma membrane | 97.7 | 98.51 |
TraesCS6B01G223700.3 | Wheat | plasma membrane | 99.84 | 96.82 |
HORVU6Hr1G049080.7 | Barley | plasma membrane | 99.51 | 96.5 |
EES07030 | Sorghum | plasma membrane | 92.94 | 90.42 |
Zm00001d016928_P010 | Maize | plasma membrane | 92.45 | 89.94 |
TraesCS2A01G343100.1 | Wheat | mitochondrion, plasma membrane | 91.13 | 88.52 |
Zm00001d050868_P004 | Maize | plasma membrane | 90.31 | 88.28 |
GSMUA_Achr7P17210_001 | Banana | cytosol | 70.77 | 87.42 |
TraesCS7A01G293300.3 | Wheat | plasma membrane | 87.85 | 86.01 |
GSMUA_Achr2P14850_001 | Banana | plastid | 87.52 | 85.28 |
VIT_07s0031g01410.t01 | Wine grape | plasma membrane | 86.04 | 83.97 |
KRH35013 | Soybean | plasma membrane | 85.88 | 83.81 |
KRG91762 | Soybean | plasma membrane | 85.71 | 83.65 |
GSMUA_AchrUn_... | Banana | plasma membrane | 86.21 | 83.33 |
VIT_18s0164g00070.t01 | Wine grape | plasma membrane | 85.39 | 83.33 |
Bra003911.1-P | Field mustard | plasma membrane | 78.0 | 83.19 |
GSMUA_Achr7P11620_001 | Banana | plasma membrane | 87.68 | 83.05 |
CDY36679 | Canola | plasma membrane | 84.56 | 82.93 |
PGSC0003DMT400032797 | Potato | cytosol, plasma membrane, plastid | 70.28 | 82.63 |
Solyc04g072570.2.1 | Tomato | extracellular | 85.22 | 82.51 |
GSMUA_Achr10P... | Banana | plasma membrane | 84.73 | 82.43 |
CDX96350 | Canola | plasma membrane | 84.4 | 82.24 |
KRH70218 | Soybean | endoplasmic reticulum | 84.24 | 82.21 |
AT1G71830.1 | Thale cress | plasma membrane | 84.07 | 81.92 |
CDX72833 | Canola | plasma membrane | 84.07 | 81.92 |
AT1G34210.1 | Thale cress | plasma membrane | 83.74 | 81.21 |
PGSC0003DMT400045607 | Potato | cytosol, plasma membrane, plastid | 69.95 | 81.14 |
Bra037006.1-P | Field mustard | mitochondrion | 63.55 | 80.79 |
KRH10503 | Soybean | cytosol, plastid | 61.9 | 80.56 |
PGSC0003DMT400070819 | Potato | plasma membrane | 82.27 | 79.02 |
Solyc01g104970.2.1 | Tomato | plasma membrane | 79.8 | 78.9 |
Bra016112.1-P | Field mustard | plasma membrane | 78.16 | 78.42 |
Solyc10g047140.1.1 | Tomato | plasma membrane | 78.98 | 78.21 |
CDY46116 | Canola | plasma membrane | 76.85 | 77.61 |
CDX72403 | Canola | plasma membrane | 76.85 | 77.61 |
CDX68975 | Canola | plasma membrane | 78.0 | 77.24 |
CDY45042 | Canola | plasma membrane | 77.5 | 77.12 |
Bra011439.1-P | Field mustard | plasma membrane | 65.85 | 77.12 |
CDX75351 | Canola | plasma membrane | 78.0 | 77.11 |
Bra034562.1-P | Field mustard | plasma membrane | 71.59 | 77.03 |
KRH43924 | Soybean | plasma membrane | 77.83 | 76.95 |
VIT_12s0055g01160.t01 | Wine grape | plasma membrane | 76.68 | 76.56 |
GSMUA_Achr10P... | Banana | mitochondrion | 88.67 | 74.48 |
VIT_12s0055g01280.t01 | Wine grape | plasma membrane | 61.74 | 73.29 |
AT4G33430.2 | Thale cress | plasma membrane | 78.65 | 72.36 |
AT2G13790.1 | Thale cress | plasma membrane | 73.23 | 71.94 |
CDY28301 | Canola | plasma membrane | 46.63 | 71.54 |
KRH58311 | Soybean | plasma membrane | 72.91 | 71.5 |
Bra032128.1-P | Field mustard | cytosol | 56.49 | 70.64 |
CDX68299 | Canola | plasma membrane | 81.77 | 70.24 |
CDX89615 | Canola | plasma membrane | 69.29 | 69.18 |
CDX93126 | Canola | plasma membrane | 69.13 | 69.02 |
AT2G13800.3 | Thale cress | plasma membrane | 67.49 | 68.39 |
CDY48450 | Canola | plasma membrane | 68.47 | 68.14 |
Bra041056.1-P | Field mustard | plasma membrane | 57.8 | 68.09 |
VIT_12s0055g01150.t01 | Wine grape | plasma membrane | 66.5 | 66.61 |
Bra032125.1-P | Field mustard | plasma membrane | 58.13 | 65.92 |
KRH42193 | Soybean | plasma membrane | 66.34 | 65.58 |
CDX71165 | Canola | plasma membrane | 66.34 | 65.37 |
CDY39690 | Canola | cytosol | 64.7 | 64.91 |
KRH58312 | Soybean | plasma membrane | 65.02 | 64.39 |
Bra013136.1-P | Field mustard | plasma membrane | 55.34 | 58.3 |
TraesCS6A01G289500.1 | Wheat | plasma membrane | 53.37 | 52.08 |
VIT_12s0121g00310.t01 | Wine grape | cytosol, mitochondrion | 25.29 | 51.85 |
TraesCS7A01G211100.1 | Wheat | plasma membrane | 52.55 | 51.2 |
TraesCS3A01G302200.1 | Wheat | plastid | 50.25 | 47.08 |
TraesCS3A01G091100.1 | Wheat | plasma membrane | 49.75 | 47.05 |
TraesCS7A01G425500.1 | Wheat | plasma membrane | 49.92 | 46.55 |
TraesCS6A01G156100.1 | Wheat | plasma membrane | 47.45 | 46.17 |
TraesCS7A01G134700.2 | Wheat | plasma membrane | 46.14 | 45.62 |
TraesCS1A01G114900.1 | Wheat | plasma membrane, vacuole | 42.36 | 41.88 |
TraesCS3A01G167100.1 | Wheat | golgi, plasma membrane | 20.03 | 35.06 |
TraesCS4A01G092500.1 | Wheat | plasma membrane | 32.18 | 33.28 |
TraesCS5A01G005300.1 | Wheat | plasma membrane | 32.68 | 32.25 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:11.3.2.1.2 | MapMan:18.4.1.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
PFAM:PF00069 | PFAM:PF08263 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 |
PANTHER:PTHR27001:SF215 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G203600 | EnsemblPlants:TraesCS6A01G203600.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:349509833..349518528
Molecular Weight (calculated)
67010.2 Da
IEP (calculated)
5.302
GRAVY (calculated)
-0.213
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAGVGHVF ANTEGDALYN LRQSLKDSNN VLQSWDPTLV NPCTWFHVTC NNDNSVIRVD LGNAQLSGVL VSQLGQLKNL QYLELYSNNI SGPIPAELGN
101: LTSLVSLDLY LNKFTGVIPD SLGNLLKLRF LRLNNNSMSG QIPKSLTDIT TLQVLDLSNN NLSGAVPSTG SFSLFTPISF ANNPLLCGPG TTKPCPGDPP
201: FSPPPPYNPP TPPTQSAGAS STGAIAGGVA AGAALVFAVP AIAFAMWRRR KPEEHFFDVP AEEDPEVHLG QLKKFSLREL QVASDNFNNK NILGRGGFGK
301: VYKGRLADGT LVAVKRLKEE RTPGGELQFQ TEVEMISMAV HRNLLRLRGF CMTPTERLLV YPYMANGSVA SRLRERQPSE PPLDWDTRRR IALGSARGLS
401: YLHDHCDPKI IHRDVKAANI LLDEDFEAVV GDFGLAKLMD YKDTHVTTAV RGTIGHIAPE YLSTGKSSEK TDVFGYGITL LELITGQRAF DLARLANDDD
501: VMLLDWVKGL LKEKKVEMLV DPDLQSNYEE TEVESLIQVA LLCTQGSPVE RPKMSEVVRM LEGDGLAERW EEWQKVEVVR QEAELAPLRN DWIVDSTYNL
601: RAVELSGPR
101: LTSLVSLDLY LNKFTGVIPD SLGNLLKLRF LRLNNNSMSG QIPKSLTDIT TLQVLDLSNN NLSGAVPSTG SFSLFTPISF ANNPLLCGPG TTKPCPGDPP
201: FSPPPPYNPP TPPTQSAGAS STGAIAGGVA AGAALVFAVP AIAFAMWRRR KPEEHFFDVP AEEDPEVHLG QLKKFSLREL QVASDNFNNK NILGRGGFGK
301: VYKGRLADGT LVAVKRLKEE RTPGGELQFQ TEVEMISMAV HRNLLRLRGF CMTPTERLLV YPYMANGSVA SRLRERQPSE PPLDWDTRRR IALGSARGLS
401: YLHDHCDPKI IHRDVKAANI LLDEDFEAVV GDFGLAKLMD YKDTHVTTAV RGTIGHIAPE YLSTGKSSEK TDVFGYGITL LELITGQRAF DLARLANDDD
501: VMLLDWVKGL LKEKKVEMLV DPDLQSNYEE TEVESLIQVA LLCTQGSPVE RPKMSEVVRM LEGDGLAERW EEWQKVEVVR QEAELAPLRN DWIVDSTYNL
601: RAVELSGPR
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.