Factsheet for TraesCS5A01G005300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 5
extracellular 4
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G004300.1	Wheat	plasma membrane	97.57	97.73
TraesCS5D01G007200.1	Wheat	plasma membrane	96.27	95.96
EES17498	Sorghum	plasma membrane	86.55	85.3
Os12t0638100-01	Rice	plasma membrane	86.71	85.19
Zm00001d041215_P002	Maize	plasma membrane	85.74	83.7
Zm00001d031211_P002	Maize	plasma membrane	84.77	76.24
GSMUA_Achr4P22330_001	Banana	plastid	67.59	75.0
GSMUA_Achr5P15040_001	Banana	plasma membrane	68.4	68.84
HORVU5Hr1G000980.2	Barley	plastid	74.23	68.15
VIT_17s0000g05570.t01	Wine grape	plasma membrane	62.07	63.62
PGSC0003DMT400065173	Potato	plasma membrane	60.29	61.9
Solyc03g113450.2.1	Tomato	plasma membrane	60.13	61.73
Bra010115.1-P	Field mustard	plasma membrane	57.86	61.13
CDY00321	Canola	plasma membrane	57.86	61.13
AT5G62710.1	Thale cress	plasma membrane	59.81	61.09
CDX84346	Canola	plasma membrane	57.54	60.79
KRH63411	Soybean	plasma membrane	56.89	60.52
CDY16762	Canola	plasma membrane	58.83	60.3
KRH54498	Soybean	plasma membrane	59.0	60.26
Bra035884.1-P	Field mustard	plasma membrane	58.67	60.13
CDX87267	Canola	plasma membrane	58.51	60.07
KRH56966	Soybean	plasma membrane	56.73	59.73
KRH03414	Soybean	plasma membrane	58.02	59.37
TraesCS4A01G092500.1	Wheat	plasma membrane	44.89	47.03
TraesCS3A01G167100.1	Wheat	golgi, plasma membrane	24.47	43.39
TraesCS6A01G289500.1	Wheat	plasma membrane	34.52	34.13
TraesCS7A01G211100.1	Wheat	plasma membrane	33.71	33.28
TraesCS7A01G134700.2	Wheat	plasma membrane	32.9	32.95
TraesCS6A01G203600.2	Wheat	cytosol	32.25	32.68
TraesCS7A01G293300.3	Wheat	plasma membrane	32.74	32.48
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	31.93	31.42
TraesCS6A01G156100.1	Wheat	plasma membrane	31.44	30.99
TraesCS7A01G425500.1	Wheat	plasma membrane	31.6	29.86
TraesCS3A01G302200.1	Wheat	plastid	31.44	29.85
TraesCS1A01G114900.1	Wheat	plasma membrane, vacuole	29.66	29.71
TraesCS3A01G091100.1	Wheat	plasma membrane	30.47	29.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.13.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714
PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44289	PANTHER:PTHR44289:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G005300	EnsemblPlants:TraesCS5A01G005300.1	SEG:seg

Description

No Description!

Coordinates

chr5A:-:3371012..3374509

Molecular Weight (calculated)

67013.0 Da

IEP (calculated)

6.004

GRAVY (calculated)

0.026

Length

617 amino acids

Sequence
(BLAST)

001: MAANPGSGTK KLSGGNGGAA ALLLFLLLCC TASMALTPDG EALLELKVAF NATAGQRLGS WRAADPNPCG WEGVSCSFPD LRVQSINLPY MQFGGIISPS
101: IGRLTKLQRL ALHQNSLHGP IPAEIRNCTE LRAIYLRANY LQGGIPPGIG DLTHLTILDL SSNLLRGAIP ATIGSLTHLR FLNLSTNFFS GEIPNVGVLG
201: TFKSSSYVGN LELCGLPIQK GCRGTLGFPA VLPHSDPLSS SGVSPITNNN KTSHFLNGVV IGSMSTMAVA LVAVLGFLWV CLLSRKKTGV NYEKMDKQTL
301: PDGAKLVTYQ WNLPYSSGEI IRRLELLDEE DVVGCGGFGT VYKMVMDDGT AFAVKRIDLN RERRDKTFEK ELEILGSIRH INLVNLRGYC RLSTAKLLIY
401: DFMELGSLDS YLHGDAQEDQ PLNWNARMKI ALGSARGLAY LHHDCSPGIV HRDIKASNVL LDRCLEPRVS DFGLARLLVD NETHVTTVVA GTFGYLAPEY
501: LQNGHSTEKS DVYSFGVLLL ELVTGKRPTD SCFLSKGLNI VGWLNTLSGE HRLEEILDER SGDAEVEAVE GILDIAAMCT DADPGQRPSM GAVLKMLEEE
601: ILSPCLSELY YEQHLEL

Best Arabidopsis Sequence Match ( AT5G62710.1 )
(BLAST)

001: MGISNWVFSV ISVATLFVSC SFALTLDGFA LLELKSGFND TRNSLENWKD SDESPCSWTG VSCNPQDQRV VSINLPYMQL GGIISPSIGK LSRLQRLALH
101: QNSLHGNIPN EITNCTELRA MYLRANFLQG GIPPDLGNLT FLTILDLSSN TLKGAIPSSI SRLTRLRSLN LSTNFFSGEI PDIGVLSRFG VETFTGNLDL
201: CGRQIRKPCR SSMGFPVVLP HAESADESDS PKRSSRLIKG ILIGAMSTMA LAFIVIFVFL WIWMLSKKER KVKKYTEVKK QKDPSETSKK LITFHGDLPY
301: SSTELIEKLE SLDEEDIVGS GGFGTVYRMV MNDLGTFAVK KIDRSRQGSD RVFEREVEIL GSVKHINLVN LRGYCRLPSS RLLIYDYLTL GSLDDLLHER
401: AQEDGLLNWN ARLKIALGSA RGLAYLHHDC SPKIVHRDIK SSNILLNDKL EPRVSDFGLA KLLVDEDAHV TTVVAGTFGY LAPEYLQNGR ATEKSDVYSF
501: GVLLLELVTG KRPTDPIFVK RGLNVVGWMN TVLKENRLED VIDKRCTDVD EESVEALLEI AERCTDANPE NRPAMNQVAQ LLEQEVMSPS SGIDYYDDSH
601: SDYC

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GX94]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.