Factsheet for TraesCS1A01G114900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G116300.1	Wheat	plasma membrane	95.29	95.14
TraesCS1B01G134800.1	Wheat	plasma membrane	94.16	94.31
HORVU1Hr1G025280.2	Barley	mitochondrion, plasma membrane, plastid, vacuole	83.44	71.69
Zm00001d009801_P001	Maize	plasma membrane	47.73	50.17
KXG21439	Sorghum	golgi, mitochondrion, plasma membrane	48.54	47.39
TraesCS3A01G091100.1	Wheat	plasma membrane	45.45	43.48
TraesCS6A01G289500.1	Wheat	plasma membrane	43.51	42.95
TraesCS7A01G211100.1	Wheat	plasma membrane	43.18	42.56
TraesCS6A01G203600.2	Wheat	cytosol	41.88	42.36
TraesCS7A01G293300.3	Wheat	plasma membrane	42.21	41.8
TraesCS7A01G425500.1	Wheat	plasma membrane	43.99	41.5
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	41.4	40.67
TraesCS6A01G156100.1	Wheat	plasma membrane	40.91	40.26
TraesCS7A01G134700.2	Wheat	plasma membrane	36.04	36.04
TraesCS3A01G302200.1	Wheat	plastid	36.85	34.92
TraesCS3A01G167100.1	Wheat	golgi, plasma membrane	18.18	32.18
TraesCS4A01G092500.1	Wheat	plasma membrane	29.38	30.73
TraesCS5A01G005300.1	Wheat	plasma membrane	29.71	29.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF49	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G114900
EnsemblPlants:TraesCS1A01G114900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:119043566..119054367

Molecular Weight (calculated)

67292.5 Da

IEP (calculated)

8.237

GRAVY (calculated)

0.025

Length

616 amino acids

Sequence
(BLAST)

001: MAGRGASWGV IRAAAVLALA VAVLGGVVAS ASRAEHVSSR AEELKALMAI KAALHDPDGI LGDWIVTAGR HRCRWTGVTC SVGRIDSLQL QNMGLAGTLS
101: PAIGKLRRLR NLLLHHNSIS GPIPDAIGGL PLLRHLSLSN NQLNGTIPDS LINSSSLFVM DLSFNNLSGT VEAFNIRNVL VSGNPLLRYP GCGGSCAAST
201: VLQQEITVPA LDPPTHSQSV AATIKLVVIC VSIGSVVTVA LFGVFEATQQ WRRRRLRIFA EIDDKKNLEV SHGHLKMYTL KDIKQATNSF HPNNILGHGG
301: FGIVYKGILL DGTIAAVKRL REFVSAGEVQ FHTEVEVMSL VVHRNLINLI GFCSEDNERI LVYPYMLNGT VASKLQAYVS GRPALDWAGR KKIALGAARG
401: LAYLHERCDP RIIHRDIKAS NILLDEHFQA IVSDFGLAKL LGQGQSHVFT AIRGTFGRIA PEYLLTGESS DKTDVFAYGL LLIELMTGRK RLDVNPDEFE
501: KGGVVDWARQ LLNDGLLSSF VDERLKYNYN YAEAEEMVQL ALLCTMYRAA HRPRMSEVVR MLEGDGSVAG RWERLKDVKA PEHGMETPKI VLSPAHYSEE
601: EHNSVELEAV QLSGPR

Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)

001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.