Factsheet for Solyc03g113450.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065173	Potato	plasma membrane	98.5	98.5
VIT_17s0000g05570.t01	Wine grape	plasma membrane	79.03	78.9
KRH56966	Soybean	plasma membrane	74.88	76.79
KRH03414	Soybean	plasma membrane	76.54	76.29
KRH54498	Soybean	plasma membrane	75.54	75.17
AT5G62710.1	Thale cress	plasma membrane	75.37	75.0
CDX84346	Canola	plasma membrane	72.38	74.49
KRH63411	Soybean	plasma membrane	71.88	74.48
Bra035884.1-P	Field mustard	plasma membrane	74.54	74.42
CDY16762	Canola	plasma membrane	74.38	74.25
CDX87267	Canola	plasma membrane	74.21	74.21
Bra010115.1-P	Field mustard	plasma membrane	72.05	74.14
CDY00321	Canola	plasma membrane	72.05	74.14
GSMUA_Achr4P22330_001	Banana	plastid	62.9	67.99
GSMUA_Achr5P15040_001	Banana	plasma membrane	62.4	61.17
EES17498	Sorghum	plasma membrane	63.23	60.7
TraesCS5B01G004300.1	Wheat	plasma membrane	61.9	60.39
Os12t0638100-01	Rice	plasma membrane	62.9	60.19
TraesCS5A01G005300.1	Wheat	plasma membrane	61.73	60.13
TraesCS5D01G007200.1	Wheat	plasma membrane	61.73	59.94
Zm00001d041215_P002	Maize	plasma membrane	62.4	59.34
Zm00001d031211_P002	Maize	plasma membrane	62.4	54.66
Solyc08g074760.2.1	Tomato	plasma membrane	50.42	51.44
Solyc07g062040.2.1	Tomato	plastid	24.29	46.5
HORVU5Hr1G000980.2	Barley	plastid	48.92	43.75
Solyc02g072310.2.1	Tomato	plasma membrane	27.62	35.24
Solyc11g008960.1.1	Tomato	plasma membrane	34.28	34.11
Solyc03g078520.2.1	Tomato	plasma membrane	33.44	33.11
Solyc04g072570.2.1	Tomato	extracellular	34.61	33.07
Solyc04g005910.2.1	Tomato	plasma membrane	33.94	32.9
Solyc10g047140.1.1	Tomato	plasma membrane	33.44	32.68
Solyc04g039730.2.1	Tomato	plasma membrane	33.78	32.58
Solyc05g010400.2.1	Tomato	plasma membrane	33.44	32.37
Solyc07g006110.2.1	Tomato	plasma membrane	33.61	32.01
Solyc02g089550.2.1	Tomato	plasma membrane	33.28	31.95
Solyc01g104970.2.1	Tomato	plasma membrane	32.61	31.82
Solyc05g005140.2.1	Tomato	plasma membrane	31.78	31.68
Solyc05g056370.2.1	Tomato	vacuole	30.95	30.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.13.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	UniProt:K4BKJ7	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00069
PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44289	PANTHER:PTHR44289:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g113450.2	EnsemblPlants:Solyc03g113450.2.1	TMHMM:TMhelix	UniParc:UPI0002767C1C	SEG:seg

Description

No Description!

Coordinates

chr3:+:63592218..63596980

Molecular Weight (calculated)

67022.5 Da

IEP (calculated)

5.397

GRAVY (calculated)

-0.083

Length

601 amino acids

Sequence
(BLAST)

001: MGVWELIFLG LFTMTIFSRS CFSLTPDGSA LLEMRTLLND TKNVLSNWND SDESPCRWTG ISCYPNEQRV QSINLPYMEL GGIISPSVGK LTRLQRLALH
101: ENSLHGVIPN EIGNCPELRA IYLRANFIQG GIPSDIGNLS ILTILDLSSN SLRGAIPSSL GRLRHLRLLN LSANFFSGEI PDVGILSTFG NDSFIGNLDL
201: CGQQVRKPCR TSMGFPVVLP HAESDEAAVP TKRSSHYIRA AVIGAISTLG FVLIVLFIFL WVWLLSKKER TAKKYTEVKK QVHKEPSAKL ITFHGDLPYP
301: SSELIEKIES LDEEDVVGAG GFGTVYRMVM NDCGTFAVKR IDRSREGSDQ VFERELEILG SIKHINLVNL RGYCRLPTAR LLIYDYLVMG SLDNFLHERV
401: DDRLLNWNAR LKVALGSARG LAYLHHDCSP KIVHRDIKSS NILLDENLEP RVSDFGLAKL LVDEEAHVTT VVAGTFGYLA PEYLQSGRAT EKSDVYSFGV
501: LLLELVTGKR PTDPSFVNRG LNVVGWMNTL LKENRLEDIL DASCRDADAE TVEAIIEIAA RCTDANPDDR PTMQQVLQYL EQEVMSPCPS DFYDESHSDY
601: S

Best Arabidopsis Sequence Match ( AT5G62710.1 )
(BLAST)

001: MGISNWVFSV ISVATLFVSC SFALTLDGFA LLELKSGFND TRNSLENWKD SDESPCSWTG VSCNPQDQRV VSINLPYMQL GGIISPSIGK LSRLQRLALH
101: QNSLHGNIPN EITNCTELRA MYLRANFLQG GIPPDLGNLT FLTILDLSSN TLKGAIPSSI SRLTRLRSLN LSTNFFSGEI PDIGVLSRFG VETFTGNLDL
201: CGRQIRKPCR SSMGFPVVLP HAESADESDS PKRSSRLIKG ILIGAMSTMA LAFIVIFVFL WIWMLSKKER KVKKYTEVKK QKDPSETSKK LITFHGDLPY
301: SSTELIEKLE SLDEEDIVGS GGFGTVYRMV MNDLGTFAVK KIDRSRQGSD RVFEREVEIL GSVKHINLVN LRGYCRLPSS RLLIYDYLTL GSLDDLLHER
401: AQEDGLLNWN ARLKIALGSA RGLAYLHHDC SPKIVHRDIK SSNILLNDKL EPRVSDFGLA KLLVDEDAHV TTVVAGTFGY LAPEYLQNGR ATEKSDVYSF
501: GVLLLELVTG KRPTDPIFVK RGLNVVGWMN TVLKENRLED VIDKRCTDVD EESVEALLEI AERCTDANPE NRPAMNQVAQ LLEQEVMSPS SGIDYYDDSH
601: SDYC

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GX94]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.