Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400028991 Potato plasma membrane 97.94 97.94
VIT_11s0037g00960.t01 Wine grape plasma membrane 75.59 74.53
KRH72362 Soybean plasma membrane 71.95 71.16
KRH02989 Soybean plasma membrane 71.79 70.34
CDY28194 Canola cytosol 33.91 69.48
CDX72249 Canola plasma membrane 69.41 68.76
Bra024069.1-P Field mustard plasma membrane 69.26 68.71
AT4G30520.1 Thale cress plasma membrane 69.89 68.06
AT2G23950.1 Thale cress plasma membrane 67.83 67.51
CDY65182 Canola plasma membrane 67.35 66.72
CDY39211 Canola plasma membrane 61.17 66.67
Bra032133.1-P Field mustard plasma membrane 67.04 66.41
CDY39685 Canola plasma membrane 66.88 66.25
GSMUA_Achr9P13420_001 Banana golgi, plasma membrane, vacuole 64.98 63.57
Solyc02g089550.2.1 Tomato plasma membrane 62.12 62.62
Solyc04g005910.2.1 Tomato plasma membrane 60.7 61.77
GSMUA_Achr3P04810_001 Banana plasma membrane 62.6 61.15
Solyc05g010400.2.1 Tomato plasma membrane 59.75 60.71
CDX68670 Canola plasma membrane 57.69 60.67
TraesCS7A01G425500.1 Wheat plasma membrane 61.65 59.57
TraesCS7D01G416400.1 Wheat plasma membrane 61.01 59.41
TraesCS7B01G324500.1 Wheat plasma membrane 60.54 59.13
Os08t0442700-01 Rice plasma membrane 63.23 58.85
Solyc04g039730.2.1 Tomato plasma membrane 56.1 56.82
Solyc05g005140.2.1 Tomato plasma membrane 52.3 54.73
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 60.86 54.16
Solyc02g072310.2.1 Tomato plasma membrane 40.1 53.72
KXG25244 Sorghum plastid 62.44 53.46
Bra011200.1-P Field mustard plastid 45.17 53.17
Solyc04g072570.2.1 Tomato extracellular 48.97 49.13
Solyc01g104970.2.1 Tomato plasma membrane 47.07 48.21
Solyc10g047140.1.1 Tomato plasma membrane 46.59 47.8
Zm00001d032142_P004 Maize plasma membrane 62.76 47.54
Solyc03g078520.2.1 Tomato plasma membrane 45.32 47.12
Solyc11g008960.1.1 Tomato plasma membrane 44.85 46.85
Solyc05g056370.2.1 Tomato vacuole 42.79 43.83
CDX68667 Canola cytosol, mitochondrion, nucleus 5.23 41.25
CDY67608 Canola cytosol, mitochondrion, nucleus 5.23 41.25
CDY00320 Canola endoplasmic reticulum 1.11 41.18
Solyc07g062040.2.1 Tomato plastid 18.54 37.26
Solyc03g113450.2.1 Tomato plasma membrane 32.01 33.61
Solyc08g074760.2.1 Tomato plasma membrane 30.74 32.94
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
UniProt:K4CB82InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27001
PANTHER:PTHR27001:SF144InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMEnsemblPlantsGene:Solyc07g006110.2EnsemblPlants:Solyc07g006110.2.1TMHMM:TMhelixUniParc:UPI000276C3AC
SEG:seg:::::
Description
No Description!
Coordinates
chr7:+:965123..969368
Molecular Weight (calculated)
69672.0 Da
IEP (calculated)
7.036
GRAVY (calculated)
-0.079
Length
631 amino acids
Sequence
(BLAST)
001: MASMFLVFVF SLLLFYPFLC FSYEARNHEV EALIAIRRSL DDPKGVLSNW DEDSVDPCSW AMISCSSENL VIALGAPSQG LSGVLSGMIS NLTNLKQVLL
101: QNNNISGHIP RELGKLPNLE TLDLSNNHFS GHVPDSLGLL NSLQYLRLNN NSLSGAIPLS LARVPQLAFL DLSFNNLSGP IPKFPTRTFN VVGNPLICGN
201: HSAETCFGSV NLMPLSFDID STGKRNSKRL AIAMGLSISF ISLFLLGFGF IIWKRNQNRK QSILNINDMQ EEDLVRLGNL RSFTFKELQR ATNSFSSKNI
301: LGAGGFGNVY RGKLGDGSLV AVKRLKDISG TAGESQFRTE LELISLAVHR NLLRLIGYCA TPNERLLVYP FMSNGSVAAR LRGKPALDWT TRKRIAIGAA
401: RGLLYLHEQC DPKIIHRDVK AANVLLDDFC EAVVGDFGLA KLLDHADSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG MRALELGKTV
501: NQKGAVLEWV KKMQHEKNVE ALIDRELGSN YDRIDVGEML QVAILCTQYL PSHRPKMSEV VRMLEGDGLA EKWAASHNYD GFSLTKNSNK TQTKHSMVPL
601: GYDDHDHDHL TMLGMMDDDY DTHAMELSGP R
Best Arabidopsis Sequence Match ( AT2G23950.1 )
(BLAST)
001: MVVMKLITMK IFSVLLLLCF FVTCSLSSEP RNPEVEALIN IKNELHDPHG VFKNWDEFSV DPCSWTMISC SSDNLVIGLG APSQSLSGTL SGSIGNLTNL
101: RQVSLQNNNI SGKIPPEICS LPKLQTLDLS NNRFSGEIPG SVNQLSNLQY LRLNNNSLSG PFPASLSQIP HLSFLDLSYN NLRGPVPKFP ARTFNVAGNP
201: LICKNSLPEI CSGSISASPL SVSLRSSSGR RTNILAVALG VSLGFAVSVI LSLGFIWYRK KQRRLTMLRI SDKQEEGLLG LGNLRSFTFR ELHVATDGFS
301: SKSILGAGGF GNVYRGKFGD GTVVAVKRLK DVNGTSGNSQ FRTELEMISL AVHRNLLRLI GYCASSSERL LVYPYMSNGS VASRLKAKPA LDWNTRKKIA
401: IGAARGLFYL HEQCDPKIIH RDVKAANILL DEYFEAVVGD FGLAKLLNHE DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE LITGMRALEF
501: GKSVSQKGAM LEWVRKLHKE MKVEELVDRE LGTTYDRIEV GEMLQVALLC TQFLPAHRPK MSEVVQMLEG DGLAERWAAS HDHSHFYHAN MSYRTITSTD
601: GNNQTKHLFG SSGFEDEDDN QALDSFAMEL SGPR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVM4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.