Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68667 | Canola | cytosol, mitochondrion, nucleus | 17.65 | 3.75 |
| CDY67608 | Canola | cytosol, mitochondrion, nucleus | 17.65 | 3.75 |
| CDY28194 | Canola | cytosol | 29.41 | 1.62 |
| CDY46116 | Canola | plasma membrane | 52.94 | 1.49 |
| CDX72403 | Canola | plasma membrane | 52.94 | 1.49 |
| CDX68975 | Canola | plasma membrane | 52.94 | 1.46 |
| CDX75351 | Canola | plasma membrane | 52.94 | 1.46 |
| CDX69484 | Canola | plasma membrane | 52.94 | 1.42 |
| CDY26481 | Canola | plasma membrane | 52.94 | 1.41 |
| CDY39211 | Canola | plasma membrane | 47.06 | 1.38 |
| CDY61508 | Canola | cytosol | 41.18 | 1.38 |
| CDY44608 | Canola | cytosol | 41.18 | 1.38 |
| CDX68670 | Canola | plasma membrane | 47.06 | 1.33 |
| CDY55159 | Canola | extracellular, plasma membrane, vacuole | 47.06 | 1.32 |
| CDY08807 | Canola | plasma membrane | 47.06 | 1.32 |
| CDY40089 | Canola | plasma membrane | 47.06 | 1.31 |
| CDX85768 | Canola | plasma membrane | 47.06 | 1.31 |
| CDY48450 | Canola | plasma membrane | 47.06 | 1.31 |
| CDX71165 | Canola | plasma membrane | 47.06 | 1.29 |
| CDY36679 | Canola | plasma membrane | 47.06 | 1.29 |
| CDX72833 | Canola | plasma membrane | 47.06 | 1.28 |
| CDX96350 | Canola | plasma membrane | 47.06 | 1.28 |
| CDY61461 | Canola | golgi, plasma membrane | 47.06 | 1.26 |
| CDY46185 | Canola | golgi, plasma membrane | 47.06 | 1.26 |
| CDX72249 | Canola | plasma membrane | 47.06 | 1.26 |
| KRH72362 | Soybean | plasma membrane | 47.06 | 1.25 |
| CDX70667 | Canola | endoplasmic reticulum, golgi | 52.94 | 1.25 |
| VIT_11s0037g00960.t01 | Wine grape | plasma membrane | 47.06 | 1.25 |
| CDX78667 | Canola | golgi, plasma membrane | 52.94 | 1.24 |
| CDX84346 | Canola | plasma membrane | 41.18 | 1.2 |
| CDY32113 | Canola | plasma membrane | 41.18 | 1.19 |
| CDX84187 | Canola | plasma membrane | 41.18 | 1.19 |
| CDY40456 | Canola | plasma membrane | 41.18 | 1.17 |
| CDY45042 | Canola | plasma membrane | 41.18 | 1.14 |
| Solyc07g006110.2.1 | Tomato | plasma membrane | 41.18 | 1.11 |
| PGSC0003DMT400028991 | Potato | plasma membrane | 41.18 | 1.11 |
| CDY65182 | Canola | plasma membrane | 41.18 | 1.1 |
| CDY39685 | Canola | plasma membrane | 41.18 | 1.1 |
| CDX83534 | Canola | plasma membrane | 41.18 | 1.09 |
| CDY48073 | Canola | plasma membrane | 41.18 | 1.09 |
| KRH02989 | Soybean | plasma membrane | 41.18 | 1.09 |
| GSMUA_Achr9P13420_001 | Banana | golgi, plasma membrane, vacuole | 41.18 | 1.09 |
| GSMUA_Achr3P04810_001 | Banana | plasma membrane | 41.18 | 1.08 |
| CDY41531 | Canola | cytosol | 35.29 | 1.04 |
| CDX84436 | Canola | cytosol | 35.29 | 1.04 |
| Os08t0442700-01 | Rice | plasma membrane | 41.18 | 1.03 |
| CDY00321 | Canola | plasma membrane | 35.29 | 1.03 |
| CDY31708 | Canola | plasma membrane | 35.29 | 1.02 |
| CDX79610 | Canola | plasma membrane | 35.29 | 1.01 |
| CDX84610 | Canola | plasma membrane | 35.29 | 1.01 |
| CDX87267 | Canola | plasma membrane | 35.29 | 1.0 |
| CDY16762 | Canola | plasma membrane | 35.29 | 1.0 |
| HORVU7Hr1G097930.4 | Barley | plasma membrane, plastid | 41.18 | 0.99 |
| CDX93126 | Canola | plasma membrane | 35.29 | 0.98 |
| CDX89615 | Canola | plasma membrane | 35.29 | 0.98 |
| TraesCS7B01G324500.1 | Wheat | plasma membrane | 35.29 | 0.93 |
| TraesCS7D01G416400.1 | Wheat | plasma membrane | 35.29 | 0.93 |
| TraesCS7A01G425500.1 | Wheat | plasma membrane | 35.29 | 0.92 |
| CDX88452 | Canola | plasma membrane, vacuole | 17.65 | 0.85 |
| CDY52435 | Canola | plasma membrane, vacuole | 17.65 | 0.85 |
| CDX68299 | Canola | plasma membrane | 35.29 | 0.85 |
| CDX77614 | Canola | plasma membrane | 29.41 | 0.81 |
| KXG25244 | Sorghum | plastid | 35.29 | 0.81 |
| CDY39449 | Canola | plasma membrane | 29.41 | 0.81 |
| Zm00001d032142_P004 | Maize | plasma membrane | 35.29 | 0.72 |
| CDY39690 | Canola | cytosol | 23.53 | 0.66 |
| CDY28301 | Canola | plasma membrane | 5.88 | 0.25 |
Protein Annotations
| EnsemblPlants:CDY00320 | EnsemblPlantsGene:GSBRNA2T00109902001 | ProteinID:CDY00320 | ProteinID:CDY00320.1 | UniParc:UPI0004EE013B | MapMan:35.2 |
Description
BnaA06g22210D
Coordinates
chrLK031917:+:1006452..1006505
Molecular Weight (calculated)
1926.4 Da
IEP (calculated)
7.714
GRAVY (calculated)
0.324
Length
17 amino acids
Sequence
(BLAST)
(BLAST)
1: MMSSSPHTQP LISLFHL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.