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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48073 Canola plasma membrane 97.66 97.66
Bra025145.1-P Field mustard plasma membrane 81.56 97.21
AT3G25560.3 Thale cress plasma membrane 87.81 86.86
CDX69484 Canola plasma membrane 69.53 70.19
CDY26481 Canola plasma membrane 69.22 69.54
TraesCS6A01G289500.1 Wheat plasma membrane 66.25 67.95
TraesCS6D01G269400.1 Wheat plasma membrane 66.25 67.73
EER88222 Sorghum plasma membrane 66.56 67.73
TraesCS6B01G319700.1 Wheat plasma membrane 65.94 67.52
TraesCS7D01G212800.1 Wheat plasma membrane 65.47 67.04
Zm00001d017913_P001 Maize plasma membrane 65.78 67.04
TraesCS7B01G118100.1 Wheat plasma membrane 65.31 66.88
TraesCS7A01G211100.1 Wheat plasma membrane 65.31 66.88
EES05592 Sorghum plasma membrane 65.31 66.77
HORVU7Hr1G043030.2 Barley plasma membrane 65.0 66.56
CDY28194 Canola cytosol 31.09 64.61
Zm00001d037297_P002 Maize plasma membrane 66.25 64.44
Os06t0274500-01 Rice extracellular 64.06 64.06
Zm00001d018347_P001 Maize cytosol 7.97 63.75
HORVU6Hr1G072620.29 Barley plasma membrane 66.09 61.3
CDY46185 Canola golgi, plasma membrane 60.0 60.38
CDX72249 Canola plasma membrane 60.0 60.28
CDY61508 Canola cytosol 47.66 60.16
CDY61461 Canola golgi, plasma membrane 59.53 60.0
CDY44608 Canola cytosol 47.5 59.96
CDX70667 Canola endoplasmic reticulum, golgi 66.41 59.03
CDX78667 Canola golgi, plasma membrane 66.25 58.64
CDY39685 Canola plasma membrane 58.12 58.4
CDY65182 Canola plasma membrane 57.97 58.24
Zm00001d045728_P003 Maize plasma membrane 65.78 57.83
CDY39211 Canola plasma membrane 51.72 57.17
CDX68670 Canola plasma membrane 51.56 55.0
Os02t0728500-01 Rice extracellular, plasma membrane 27.03 53.4
CDX77614 Canola plasma membrane 50.31 52.44
CDY39449 Canola plasma membrane 50.31 52.36
CDY36679 Canola plasma membrane 50.78 52.33
CDX96350 Canola plasma membrane 51.09 52.32
CDX72833 Canola plasma membrane 50.94 52.16
CDY46116 Canola plasma membrane 48.44 51.41
CDX72403 Canola plasma membrane 48.28 51.24
CDX75351 Canola plasma membrane 48.91 50.81
CDX68975 Canola plasma membrane 48.75 50.73
CDY45042 Canola plasma membrane 48.28 50.49
CDY48450 Canola plasma membrane 47.97 50.16
CDX71165 Canola plasma membrane 47.5 49.19
CDY40089 Canola plasma membrane 46.88 49.1
CDX85768 Canola plasma membrane 46.88 49.1
CDX89615 Canola plasma membrane 46.41 48.69
CDY08807 Canola plasma membrane 46.25 48.68
CDX93126 Canola plasma membrane 46.25 48.52
CDY55159 Canola extracellular, plasma membrane, vacuole 46.09 48.52
CDY39690 Canola cytosol 45.0 47.45
CDX84436 Canola cytosol 41.09 45.42
CDY41531 Canola cytosol 41.09 45.42
CDX68299 Canola plasma membrane 50.0 45.13
CDY28301 Canola plasma membrane 26.56 42.82
CDY00320 Canola endoplasmic reticulum 1.09 41.18
CDY52435 Canola plasma membrane, vacuole 19.84 36.18
CDY00321 Canola plasma membrane 32.5 35.62
CDX88452 Canola plasma membrane, vacuole 19.53 35.61
CDX84346 Canola plasma membrane 32.19 35.27
CDY16762 Canola plasma membrane 32.66 34.72
CDX87267 Canola plasma membrane 32.19 34.28
CDY31708 Canola plasma membrane 28.91 31.52
CDX84187 Canola plasma membrane 28.75 31.24
CDY32113 Canola plasma membrane 28.59 31.12
CDX84610 Canola plasma membrane 28.75 30.98
CDX79610 Canola plasma membrane 28.59 30.81
CDY40456 Canola plasma membrane 28.59 30.65
CDY67608 Canola cytosol, mitochondrion, nucleus 3.75 30.0
CDX68667 Canola cytosol, mitochondrion, nucleus 3.75 30.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078D5E8EnsemblPlants:CDX83534
ProteinID:CDX83534ProteinID:CDX83534.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00139146001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF217InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE3940:
Description
BnaC07g22740D
Coordinates
chrLK031833:-:186337..190897
Molecular Weight (calculated)
71072.2 Da
IEP (calculated)
7.287
GRAVY (calculated)
-0.208
Length
640 amino acids
Sequence
(BLAST)
001: MQQDFIQTKM VQRRREVRES YGLSCSSLFF FIALLYSSSA ELTDKGVNYE VLALIGIKSS LIDPHGVLMN WDDTAVDPCS WNMISCSADG FVLSLGAPSQ
101: DLSGTLSSSI GNLTYLQTVL LQNNYITGHI PPEIGKLMKL KTLDLSTNNF TGQIPSTLSA STNLQYLRVN NNSLTGTIPS SLANMTQLTF LDLSYNNLSG
201: PVPRSHAKTF NVMGNPQICP TGTEKDCNGT QPKPTILNLN NEASDGGTKN RKIAIAFGVG LACVCLLITA FGFLLWWRRR HNQQIFFDVN DQNKEEVCLG
301: NLRRFSFKEL QSATSNFSSK NLVGKGGFGN VYKGRLHDGT IVAVKRLKDV NNGGGEIQFQ TEVEMISLAV HRNLLRLYGL CTTSMERLLV YPYMSNGSVA
401: SRLKAKPVLD WSTRKRIALG AARGLLYLHE QCDPKIIHRD VKAANILLDD YYEAVVGDFG LAKLLDHEES HVTTAVRGTV GHIAPEYLST GQSSEKTDVF
501: GFGILLLELI TGLRALEFGK AANQRGAILD WVKKLQQEKN LEQIIDKDLE RSYDRIEVEE IVKVALLCTQ YLPIHRPKMS EVVRMLEGDG LVEKWEASSQ
601: RTETNRSYSK PNEFSSSERY SDLTDDSSVL VQAMELSGPR
Best Arabidopsis Sequence Match ( AT3G25560.1 )
(BLAST)
001: MLQGRREAKK SYALFSSTFF FFFICFLSSS SAELTDKGVN FEVVALIGIK SSLTDPHGVL MNWDDTAVDP CSWNMITCSD GFVIRLEAPS QNLSGTLSSS
101: IGNLTNLQTV LLQNNYITGN IPHEIGKLMK LKTLDLSTNN FTGQIPFTLS YSKNLQYLRV NNNSLTGTIP SSLANMTQLT FLDLSYNNLS GPVPRSLAKT
201: FNVMGNSQIC PTGTEKDCNG TQPKPMSITL NSSQNKSSDG GTKNRKIAVV FGVSLTCVCL LIIGFGFLLW WRRRHNKQVL FFDINEQNKE EMCLGNLRRF
301: NFKELQSATS NFSSKNLVGK GGFGNVYKGC LHDGSIIAVK RLKDINNGGG EVQFQTELEM ISLAVHRNLL RLYGFCTTSS ERLLVYPYMS NGSVASRLKA
401: KPVLDWGTRK RIALGAGRGL LYLHEQCDPK IIHRDVKAAN ILLDDYFEAV VGDFGLAKLL DHEESHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELITGLRA LEFGKAANQR GAILDWVKKL QQEKKLEQIV DKDLKSNYDR IEVEEMVQVA LLCTQYLPIH RPKMSEVVRM LEGDGLVEKW EASSQRAETN
601: RSYSKPNEFS SSERYSDLTD DSSVLVQAME LSGPR
Arabidopsis Description
NIK2NSP-interacting kinase 2 [Source:UniProtKB/TrEMBL;Acc:F4JA15]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.