Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69430
CDX70708
CDX72702
CDX85492
CDX90332
CDY07991
CDY12143
CDY16992
CDY38092
CDY38095
CDY41977
CDY53185
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G13790.1 CDX72702 AT4G39400.1 17600708
AT2G13790.1 CDX90332 AT4G39400.1 17600708
AT2G13790.1 CDY12143 AT4G39400.1 17600708
AT2G13790.1 CDY41977 AT4G39400.1 17600708
AT2G13790.1 CDY53185 AT4G39400.1 17600708
AT2G13790.1 CDY66903 AT4G39400.1 17600708
AT2G13790.1 CDY66904 AT4G39400.1 17600708
AT2G13790.1 CDX69430 AT5G48380.1 19616764
AT2G13790.1 CDX70708 AT5G48380.1 19616764
AT2G13790.1 CDX85492 AT5G48380.1 19616764
AT2G13790.1 CDY07991 AT5G48380.1 19616764
AT2G13790.1 CDY16992 AT5G48380.1 19616764
AT2G13790.1 CDY38092 AT5G48380.1 19616764
AT2G13790.1 CDY38095 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra041056.1-P Field mustard plasma membrane 83.99 99.42
CDX71165 Canola plasma membrane 95.59 94.66
AT2G13790.1 Thale cress plasma membrane 83.33 82.26
CDX89615 Canola plasma membrane 80.72 80.98
CDX93126 Canola plasma membrane 80.23 80.49
AT2G13800.3 Thale cress plasma membrane 76.47 77.87
CDY46116 Canola plasma membrane 76.14 77.28
CDY45042 Canola plasma membrane 77.12 77.12
CDX72403 Canola plasma membrane 75.98 77.11
CDX75351 Canola plasma membrane 77.61 77.11
CDX68975 Canola plasma membrane 77.45 77.07
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 63.4 74.9
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 63.24 73.71
Solyc10g047140.1.1 Tomato plasma membrane 74.02 73.66
Solyc01g104970.2.1 Tomato plasma membrane 73.69 73.21
CDY39690 Canola cytosol 72.06 72.65
VIT_12s0055g01160.t01 Wine grape plasma membrane 72.39 72.62
VIT_12s0055g01280.t01 Wine grape plasma membrane 60.46 72.12
CDY28301 Canola plasma membrane 46.41 71.54
CDY36679 Canola plasma membrane 71.73 70.69
KRH58311 Soybean plasma membrane 71.57 70.53
CDX72833 Canola plasma membrane 71.57 70.08
CDX96350 Canola plasma membrane 71.57 70.08
GSMUA_Achr7P17210_001 Banana cytosol 55.88 69.37
TraesCS6D01G186900.2 Wheat plasma membrane 67.97 68.87
GSMUA_Achr10P... Banana plasma membrane 70.42 68.85
Os08t0174700-01 Rice plasma membrane 70.1 68.75
TraesCS6A01G203600.2 Wheat cytosol 68.14 68.47
GSMUA_Achr2P14850_001 Banana plastid 69.77 68.32
GSMUA_AchrUn_... Banana plasma membrane 70.1 68.1
TraesCS7D01G291200.3 Wheat plasma membrane 68.95 67.95
TraesCS7A01G293300.3 Wheat plasma membrane 68.95 67.85
EES07030 Sorghum plasma membrane 69.28 67.73
KXG24562 Sorghum plasma membrane 69.77 67.67
Zm00001d016928_P010 Maize plasma membrane 69.12 67.57
EES12285 Sorghum plasma membrane 68.63 67.52
TraesCS7B01G182300.1 Wheat plasma membrane 68.46 67.36
TraesCS2B01G340700.1 Wheat plasma membrane 68.95 67.3
Os04t0457800-01 Rice plasma membrane 68.95 67.2
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 68.79 67.15
Zm00001d050868_P004 Maize plasma membrane 68.3 67.09
TraesCS2D01G321400.1 Wheat mitochondrion 68.63 66.99
Zm00001d024430_P002 Maize plasma membrane 69.77 66.93
Zm00001d025580_P001 Maize plasma membrane 67.97 66.88
TraesCS6B01G223700.3 Wheat plasma membrane 68.46 66.72
HORVU6Hr1G049080.7 Barley plasma membrane 68.46 66.72
GSMUA_Achr7P11620_001 Banana plasma membrane 69.93 66.56
KRH42193 Soybean plasma membrane 63.89 63.47
KRH58312 Soybean plasma membrane 63.07 62.76
HORVU7Hr1G068990.2 Barley mitochondrion 68.95 62.61
Zm00001d049480_P005 Maize plasma membrane 66.67 61.91
GSMUA_Achr10P... Banana mitochondrion 70.59 59.59
HORVU2Hr1G080020.6 Barley cytosol 68.79 59.46
CDX68299 Canola plasma membrane 68.63 59.24
CDY28194 Canola cytosol 28.43 56.49
Os06t0225300-01 Rice plasma membrane 54.09 53.73
CDY40089 Canola plasma membrane 50.0 50.08
CDX85768 Canola plasma membrane 50.0 50.08
CDY55159 Canola extracellular, plasma membrane, vacuole 49.35 49.67
CDY08807 Canola plasma membrane 49.35 49.67
CDY61508 Canola cytosol 40.2 48.52
CDX69484 Canola plasma membrane 50.16 48.42
CDY44608 Canola cytosol 40.03 48.32
CDY48073 Canola plasma membrane 50.49 48.28
CDX83534 Canola plasma membrane 50.16 47.97
CDY26481 Canola plasma membrane 49.35 47.41
CDY00320 Canola endoplasmic reticulum 1.31 47.06
CDY41531 Canola cytosol 43.63 46.11
CDX84436 Canola cytosol 43.63 46.11
CDY39685 Canola plasma membrane 47.71 45.84
CDY61461 Canola golgi, plasma membrane 47.55 45.83
CDY46185 Canola golgi, plasma membrane 47.55 45.75
CDY65182 Canola plasma membrane 47.55 45.68
CDX72249 Canola plasma membrane 46.9 45.05
CDX77614 Canola plasma membrane 43.95 43.81
CDY39449 Canola plasma membrane 43.79 43.58
CDY39211 Canola plasma membrane 40.69 43.01
CDX70667 Canola endoplasmic reticulum, golgi 49.67 42.22
CDX78667 Canola golgi, plasma membrane 49.51 41.91
CDX68670 Canola plasma membrane 40.85 41.67
CDX88452 Canola plasma membrane, vacuole 20.42 35.61
CDY52435 Canola plasma membrane, vacuole 20.1 35.04
CDX84346 Canola plasma membrane 31.86 33.39
CDY00321 Canola plasma membrane 31.7 33.22
CDX84187 Canola plasma membrane 31.37 32.6
CDY31708 Canola plasma membrane 31.21 32.54
CDX84610 Canola plasma membrane 31.21 32.15
CDX79610 Canola plasma membrane 31.21 32.15
CDY16762 Canola plasma membrane 31.21 31.73
CDY32113 Canola plasma membrane 29.9 31.12
CDX87267 Canola plasma membrane 30.56 31.11
CDY40456 Canola plasma membrane 30.07 30.82
CDY67608 Canola cytosol, mitochondrion, nucleus 2.29 17.5
CDX68667 Canola cytosol, mitochondrion, nucleus 2.29 17.5
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078IC59UniProt:A0A078IC59
EnsemblPlants:CDY48450ProteinID:CDY48450ProteinID:CDY48450.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004871GO:GO:0005102GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019199GO:GO:0019538GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00089499001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERK
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEC72ASEG:seg::::
Description
BnaAnng09800DBnaAnng09800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IC59]
Coordinates
chrLK032774:+:11601..15297
Molecular Weight (calculated)
67627.1 Da
IEP (calculated)
5.146
GRAVY (calculated)
-0.212
Length
612 amino acids
Sequence
(BLAST)
001: MEQQQGPSLR SLTSLILLFV LLLRAAGNPE GDALYELKKS LVDDPNSVLQ SWDATLVSPC TWFHITCNSE NSVIRVDLGN ANLSGQLVPQ LRHLPSLQYL
101: ELYSNNITGE IPEELGDLAE LVSLDLYMNK ISGPIPSSLG KLEKLKFLRL NNNKLSGEIP RSLTNVSLQV LDIANNGLSG DIPVNGSFTL FTPISFANNS
201: LRPLPDPPST SNSPPQPPPG KKTTTSIAIG AAAGAAILCA GPAIALAWWL RSKAQDRFVD IPGEEDPEVH LGQLRRFSLR ELLVATDNFS NKNVLGRGGF
301: GKVYKGRLAN GKLVAVKRLK EERTMGGELQ FQTEVEMISL AVHRNLLRLH GFCMTPTERL LVYPYMSNGS VASCLRESHE GNPALDWPKR KHIALGAARG
401: LAYLHDHCDQ KIIHRDVKAA NILLDENFEA VVGDFGLAKL MNYNESHVTT AVRGTIGHIA PEYLSTGKSS EKTDVFGYGV MLLELITGQK AFDLARLAND
501: DDIMLLDWVK EVLKEKKLES LVDAGLEGKY VDKEVEQLIQ MALLCTQSSS LERPNMSEVV RMLEGDGLAE KWEEWEKEEM LTDDFNYPHA DINWLIPESL
601: SHIENDYPSG PR
Best Arabidopsis Sequence Match ( AT2G13790.1 )
(BLAST)
001: MTSSKMEQRS LLCFLYLLLL FNFTLRVAGN AEGDALTQLK NSLSSGDPAN NVLQSWDATL VTPCTWFHVT CNPENKVTRV DLGNAKLSGK LVPELGQLLN
101: LQYLELYSNN ITGEIPEELG DLVELVSLDL YANSISGPIP SSLGKLGKLR FLRLNNNSLS GEIPMTLTSV QLQVLDISNN RLSGDIPVNG SFSLFTPISF
201: ANNSLTDLPE PPPTSTSPTP PPPSGGQMTA AIAGGVAAGA ALLFAVPAIA FAWWLRRKPQ DHFFDVPAEE DPEVHLGQLK RFTLRELLVA TDNFSNKNVL
301: GRGGFGKVYK GRLADGNLVA VKRLKEERTK GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPEGNPAL DWPKRKHIAL
401: GSARGLAYLH DHCDQKIIHR DVKAANILLD EEFEAVVGDF GLAKLMNYND SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
501: RLANDDDIML LDWVKEVLKE KKLESLVDAE LEGKYVETEV EQLIQMALLC TQSSAMERPK MSEVVRMLEG DGLAERWEEW QKEEMPIHDF NYQAYPHAGT
601: DWLIPYSNSL IENDYPSGPR
Arabidopsis Description
SERK4Somatic embryogenesis receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKG5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.