CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68299
CDX69121
CDX72702
CDX72833
CDX74345
CDX75483
CDX76321
CDX90332
CDX91898
CDX96350
CDY02804
CDY07049	plasma membrane
CDY07203
CDY07629	plasma membrane
CDY12143
CDY17529
CDY20508	plasma membrane
CDY23595	plasma membrane
CDY24191	plasma membrane
CDY32716
CDY36679
CDY41977
CDY43996	plasma membrane
CDY51145
CDY53185
CDY60337	plasma membrane
CDY61712	plasma membrane
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39400.1	CDX68299	AT1G71830.1	16473966
AT4G39400.1	CDX72833	AT1G71830.1	16473966
AT4G39400.1	CDX96350	AT1G71830.1	16473966
AT4G39400.1	CDY36679	AT1G71830.1	16473966
AT4G39400.1	CDY07049	AT2G40060.1	23975899
AT4G39400.1	CDY07629	AT2G40060.1	23975899
AT4G39400.1	CDY20508	AT2G40060.1	23975899
AT4G39400.1	CDY60337	AT2G40060.1	23975899
AT4G39400.1	CDY61712	AT2G40060.1	23975899
AT4G39400.1	CDY23595	AT3G13380.1	24064770
AT4G39400.1	CDY24191	AT3G13380.1	24064770
AT4G39400.1	CDY43996	AT3G13380.1	24064770
AT4G39400.1	CDX74345	AT4G00710.1	18653891
AT4G39400.1	CDX91898	AT4G00710.1	18653891
AT4G39400.1	CDY07203	AT4G00710.1	18653891
AT4G39400.1	CDY51145	AT4G00710.1	18653891
AT4G39400.1	CDX69121	AT4G35230.1	18653891
AT4G39400.1	CDX75483	AT4G35230.1	18653891
AT4G39400.1	CDX76321	AT4G35230.1	18653891
AT4G39400.1	CDY17529	AT4G35230.1	18653891
AT4G39400.1	CDX72702	AT4G39400.1	15935775
AT4G39400.1	CDX90332	AT4G39400.1	15935775
AT4G39400.1	CDY12143	AT4G39400.1	15935775
AT4G39400.1	CDY41977	AT4G39400.1	15935775
AT4G39400.1	CDY53185	AT4G39400.1	15935775
AT4G39400.1	CDY66903	AT4G39400.1	15935775
AT4G39400.1	CDY66904	AT4G39400.1	15935775
AT4G39400.1	CDX72702	AT4G39400.1	16473966
AT4G39400.1	CDX90332	AT4G39400.1	16473966
AT4G39400.1	CDY12143	AT4G39400.1	16473966
AT4G39400.1	CDY41977	AT4G39400.1	16473966
AT4G39400.1	CDY53185	AT4G39400.1	16473966
AT4G39400.1	CDY66903	AT4G39400.1	16473966
AT4G39400.1	CDY66904	AT4G39400.1	16473966
AT4G39400.1	CDY02804	AT5G58220.1	15319482
AT4G39400.1	CDY32716	AT5G58220.1	15319482

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90332	Canola	plasma membrane	94.39	91.32
CDY66904	Canola	cytosol, peroxisome, plasma membrane	35.05	78.95
CDY66903	Canola	extracellular	29.81	76.5
CDX72702	Canola	plasma membrane	80.65	76.44
AT4G39400.1	Thale cress	plasma membrane, vacuole	85.33	76.34
CDY53185	Canola	plasma membrane	76.45	76.16
CDY41977	Canola	plasma membrane	80.0	76.02
KRH64131	Soybean	plasma membrane	65.23	58.8
VIT_07s0031g01850.t01	Wine grape	plasma membrane	66.17	58.76
KRH53813	Soybean	plasma membrane	64.95	58.7
PGSC0003DMT400050728	Potato	golgi, plasma membrane, vacuole	64.58	57.3
Solyc04g051510.1.1	Tomato	golgi, plasma membrane, vacuole	64.3	57.0
GSMUA_Achr6P35950_001	Banana	plasma membrane	47.66	56.79
GSMUA_AchrUn_...	Banana	plasma membrane	41.87	55.72
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	40.93	53.35
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	43.64	52.89
Zm00001d043634_P001	Maize	plasma membrane	53.36	51.26
Zm00001d011721_P001	Maize	plasma membrane	53.64	51.16
EES03532	Sorghum	plasma membrane	53.27	50.89
TraesCS3D01G246500.1	Wheat	plasma membrane	53.46	50.89
TraesCS3A01G245000.1	Wheat	plasma membrane	53.36	50.85
Os01t0718300-01	Rice	plasma membrane	53.18	50.76
HORVU3Hr1G068000.2	Barley	plastid	53.27	48.72
TraesCS3B01G275000.1	Wheat	plasma membrane, plastid	53.27	47.34
HORVU3Hr1G068020.2	Barley	cytosol	36.07	45.84
HORVU3Hr1G068010.1	Barley	plasma membrane	24.67	45.6
CDY10547	Canola	plasma membrane	46.82	45.46
CDY43996	Canola	plasma membrane	46.17	45.4
CDY23595	Canola	plasma membrane	45.98	45.18
CDY17621	Canola	plasma membrane	46.64	44.32
CDY42373	Canola	plasma membrane	48.22	44.29
CDY03088	Canola	plasma membrane	46.64	43.93
CDY24190	Canola	cytosol	6.26	43.51
Zm00001d014769_P001	Maize	cytosol, extracellular, nucleus	11.5	43.01
CDY24191	Canola	cytosol	21.03	41.44
TraesCS3D01G496100.1	Wheat	plasma membrane	38.41	37.99
TraesCS3B01G550900.1	Wheat	plasma membrane	38.32	37.86
OQU86764	Sorghum	plasma membrane	34.39	37.06
TraesCS3B01G551200.1	Wheat	plasma membrane	37.1	36.76
CDX70023	Canola	plasma membrane	27.2	34.81
TraesCS3A01G490100.1	Wheat	plasma membrane	28.6	34.19
CDY49128	Canola	vacuole	12.34	32.35
CDX98990	Canola	plasma membrane	27.94	32.29
CDY42431	Canola	plasma membrane	14.67	29.73
CDX73079	Canola	plasma membrane	30.65	29.26
CDX96537	Canola	plasma membrane	30.47	29.06
CDY16355	Canola	cytosol, plastid, vacuole	9.25	23.8
CDY66377	Canola	cytosol, plastid, vacuole	9.16	23.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.1.1	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078FJ50
UniProt:A0A078FJ50	EnsemblPlants:CDY12143	ProteinID:CDY12143	ProteinID:CDY12143.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00061140001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27000	PANTHER:PTHR27000:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0004EDC639	SEG:seg

Description

BnaC03g60590DBnaC03g60590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ50]

Coordinates

chrLK032017:+:840528..844584

Molecular Weight (calculated)

116816.0 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.071

Length

1070 amino acids

Sequence
(BLAST)

0001: MRMKTLPTFF LFLLTLSFSS QTSTSQTHQL ISFKNALADK NLLPDWSPNK NPCTFEGVTC RADKISSIDL SSKPLNVGFS AVASSLLSLT GLESLFLSNT
0101: NINGSVSGTK CSASLTSLDL SRNSISGPVS ALSSLGSCIG LKSLNVSSNS LEFPGKISGG GLKLSSSSLE VLDLSKNLLS GANLVGWIVS GGCGELKHLD
0201: ISGNKISGDA DVSPCVNLEF LDVSSNNFST VIPYLGDCSA LQHLDISGNK LSGDFSTAFS SCTNLRSLNI SCNAFTGPIS SSLPLKSLEY LSLAENKFTG
0301: EIPELLSGAC GTLTGLDLSR NDFHGTVPPF FASCSLLESL VLSTNNFSGE LPMDTLLKMR GLKVLDLSFN KFSGELPESL ANLSLTTLDL SSNNFSGQIL
0401: PTLCRDGENT LQELYLQNNA FTGKIPPTLS NCSDLVSLHL SFNYLSGTIP SSLGSLTKLR DLKLWMNMLQ GEIPRELMYL TTLETLILDF NDLTGEIPFG
0501: LSNCTNLNWI SLSNNRLTGQ IPRWIGRLEN LAILKLSNNS FNGNIPAELG DCRSLIWLDL NTNYFNGTIP PEIPEQLNRV STRNPCNFTR EIGSMPYLFI
0601: LNLGHNFISG SIPDEVGDLR GLNILDLSSN KLDGRIPQSM SALTMLTEID LSNNLLTGPI PEMGQFETFP PGKFLNNSGL CGYPLPRCGD ANADAFAHRS
0701: HGRKQPSLAG SVAMGLLFSF MRRRRRMREA AMEDPSDGTT ANNNTDWKLT GAKEALSINL AAFEKPLRKL TFADLLKATN GFHENSMIGS GGFGDVYKAV
0801: LKDGTAVAIK KLIQISGQGD REFMAEMETI GKIKHRNLVP LLGYCKVGEE RLLVYEFMKY GSLEDVLHDP KKKAGVKLNW FTRQKIAIGA ARGLAFLHHN
0901: CIPHIIHRDM KSSNVLLDEN LEARVSDFGM ARLMSAMDTH LSVSTLAGTP GYVPPEYYQS FRCSTKGDVY SYGVVLLELL TGRRPTDSPD FGDNNLVGWV
1001: RQHAKLQIRD VFDPLLIKED PAREIELLQH LKIAVACLDD RAWRRPTMLE VMAMFKEIQT GIKEVPEGKF

Best Arabidopsis Sequence Match ( AT4G39400.1 )
(BLAST)

0001: MKTFSSFFLS VTTLFFFSFF SLSFQASPSQ SLYREIHQLI SFKDVLPDKN LLPDWSSNKN PCTFDGVTCR DDKVTSIDLS SKPLNVGFSA VSSSLLSLTG
0101: LESLFLSNSH INGSVSGFKC SASLTSLDLS RNSLSGPVTT LTSLGSCSGL KFLNVSSNTL DFPGKVSGGL KLNSLEVLDL SANSISGANV VGWVLSDGCG
0201: ELKHLAISGN KISGDVDVSR CVNLEFLDVS SNNFSTGIPF LGDCSALQHL DISGNKLSGD FSRAISTCTE LKLLNISSNQ FVGPIPPLPL KSLQYLSLAE
0301: NKFTGEIPDF LSGACDTLTG LDLSGNHFYG AVPPFFGSCS LLESLALSSN NFSGELPMDT LLKMRGLKVL DLSFNEFSGE LPESLTNLSA SLLTLDLSSN
0401: NFSGPILPNL CQNPKNTLQE LYLQNNGFTG KIPPTLSNCS ELVSLHLSFN YLSGTIPSSL GSLSKLRDLK LWLNMLEGEI PQELMYVKTL ETLILDFNDL
0501: TGEIPSGLSN CTNLNWISLS NNRLTGEIPK WIGRLENLAI LKLSNNSFSG NIPAELGDCR SLIWLDLNTN LFNGTIPAAM FKQSGKIAAN FIAGKRYVYI
0601: KNDGMKKECH GAGNLLEFQG IRSEQLNRLS TRNPCNITSR VYGGHTSPTF DNNGSMMFLD MSYNMLSGYI PKEIGSMPYL FILNLGHNDI SGSIPDEVGD
0701: LRGLNILDLS SNKLDGRIPQ AMSALTMLTE IDLSNNNLSG PIPEMGQFET FPPAKFLNNP GLCGYPLPRC DPSNADGYAH HQRSHGRRPA SLAGSVAMGL
0801: LFSFVCIFGL ILVGREMRKR RRKKEAELEM YAEGHGNSGD RTANNTNWKL TGVKEALSIN LAAFEKPLRK LTFADLLQAT NGFHNDSLIG SGGFGDVYKA
0901: ILKDGSAVAI KKLIHVSGQG DREFMAEMET IGKIKHRNLV PLLGYCKVGD ERLLVYEFMK YGSLEDVLHD PKKAGVKLNW STRRKIAIGS ARGLAFLHHN
1001: CSPHIIHRDM KSSNVLLDEN LEARVSDFGM ARLMSAMDTH LSVSTLAGTP GYVPPEYYQS FRCSTKGDVY SYGVVLLELL TGKRPTDSPD FGDNNLVGWV
1101: KQHAKLRISD VFDPELMKED PALEIELLQH LKVAVACLDD RAWRRPTMVQ VMAMFKEIQA GSGIDSQSTI RSIEDGGFST IEMVDMSIKE VPEGKL

Arabidopsis Description

BRI1Protein BRASSINOSTEROID INSENSITIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:O22476]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.