CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49128	Canola	vacuole	47.73	61.76
Bra008139.1-P	Field mustard	cytosol	82.01	54.95
CDY16355	Canola	cytosol, plastid, vacuole	28.98	36.78
CDY66377	Canola	cytosol, plastid, vacuole	28.79	36.54
AT1G74360.1	Thale cress	plasma membrane	74.05	35.35
CDX96537	Canola	plasma membrane	74.81	35.2
CDX73079	Canola	plasma membrane	74.43	35.06
GSMUA_Achr3P18780_001	Banana	cytosol	34.47	32.33
TraesCS7D01G424900.1	Wheat	plasma membrane	42.8	30.01
Os03t0400800-00	Rice	plasma membrane	42.23	29.61
Zm00001d041327_P002	Maize	mitochondrion	39.77	29.29
KXG23808	Sorghum	plasma membrane	41.29	28.8
Os08t0322500-00	Rice	cytosol	39.58	28.47
HORVU7Hr1G099370.4	Barley	cytosol	40.34	27.95
OQU79417	Sorghum	plasma membrane	37.88	27.29
VIT_17s0000g06710.t01	Wine grape	plasma membrane	55.3	26.52
PGSC0003DMT400063400	Potato	plasma membrane	54.17	26.17
Solyc03g115610.2.1	Tomato	plasma membrane	52.84	25.55
KRH03535	Soybean	plasma membrane	52.27	25.3
Solyc06g069650.2.1	Tomato	plasma membrane	52.08	25.02
PGSC0003DMT400083089	Potato	plasma membrane	51.7	24.68
KRH56872	Soybean	plasma membrane	51.33	23.46
GSMUA_Achr6P23960_001	Banana	cytosol	31.44	23.28
KRH63281	Soybean	plasma membrane	46.59	22.59
KRH54609	Soybean	plasma membrane	46.59	22.1
TraesCS2D01G190200.2	Wheat	plasma membrane	45.27	21.53
Os07t0597200-01	Rice	plasma membrane	45.08	21.52
TraesCS2B01G208900.1	Wheat	plasma membrane	44.89	21.31
TraesCS2D01G053000.1	Wheat	plasma membrane	40.34	21.13
HORVU2Hr1G034370.1	Barley	plasma membrane	44.7	21.05
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	35.04	21.02
TraesCS2A01G182400.1	Wheat	plasma membrane	44.13	20.99
Zm00001d022044_P001	Maize	plasma membrane	43.18	20.71
EER99654	Sorghum	plasma membrane	42.42	20.38
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	31.82	20.34
CDY66903	Canola	extracellular	13.26	16.79
CDY12143	Canola	plasma membrane	29.73	14.67
CDX90332	Canola	plasma membrane	28.03	13.38
CDY41977	Canola	plasma membrane	28.03	13.14
CDY03088	Canola	plasma membrane	28.03	13.03
CDY17621	Canola	plasma membrane	27.65	12.97
CDY43996	Canola	plasma membrane	26.33	12.78
CDY10547	Canola	plasma membrane	26.52	12.7
CDX72702	Canola	plasma membrane	27.08	12.67
CDY53185	Canola	plasma membrane	25.76	12.66
CDY23595	Canola	plasma membrane	25.95	12.58
CDY42373	Canola	plasma membrane	27.65	12.53
CDY24191	Canola	cytosol	11.55	11.23
CDX70023	Canola	plasma membrane	16.29	10.29
CDX98990	Canola	plasma membrane	16.48	9.4
CDY66904	Canola	cytosol, peroxisome, plasma membrane	4.73	5.26
CDY24190	Canola	cytosol	0.38	1.3

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078HXG1	UniProt:A0A078HXG1	EnsemblPlants:CDY42431	ProteinID:CDY42431
ProteinID:CDY42431.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00074738001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR27000	PANTHER:PTHR27000:SF54
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE47EE	SEG:seg

Description

BnaC02g22770DBnaC02g22770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXG1]

Coordinates

chrLK032524:+:138729..141861

Molecular Weight (calculated)

58620.7 Da

IEP (calculated)

4.478

GRAVY (calculated)

0.015

Length

528 amino acids

Sequence
(BLAST)

001: MVSPGIMAHG DSNSLLSLVS FLLFLLITAT AVTGDSMDSD REVLLSFKSY LESWNPTERG KYNEWETEKQ DVCPLFGNFS ALTQLAFLDL SNNTIGGSIP
101: DDLNRCHNLK HLNLSLNIIE GELSFSGLSN LEVLDLSVNQ IAGDIHSTFP TLCNRLVVAN LSTNNFSGRI DDIFNEGNCT LQVLDFSGNG FVGEFPGQVL
201: NCQNLNVLDL WGNNFTGNIP AEIGSISSLR GFNLVFLDLS RNNFGGELQE IFGRFTQSLM FLVLAYNNFS GDIPREYGNM PRLQALDLSF NRLTGSIPAS
301: FGKLTSLLWL MLANNSLSGE IPREIGNCSS LLWLNVANNQ LSGKLPIKIG LLPLAFLNLT RNKFSGQIPK EIGNIYNLQN LDLSYNNFSG NFPTSLNDLN
401: EMSKFNISYN PFIHGVIPST GQLTTFEKDS FLGNPLLQFP SFVIQSGNNN TSSGERDNGR DEDDEAAIDM LAFYWSTFSF YVVALVGILV LVYFDCPWCR
501: AWLRLVDAFT VIIAYEIKKP RDSKSHFK

Best Arabidopsis Sequence Match ( AT1G74170.1 )
(BLAST)

001: MGVECNRKSG RITNIAFGIG FIIENPLLNL SLLHPFEDVR SLDLSSSRSC EDCGFSGLFD DVEGYKSLSR LRNLEILDLS SHRFNNSIFP FLNAATSLTT
101: LFLTYNNMHS PFLVKEFKDL TNLEHLDLRG NRFNGSIPTQ DYNSLRRFRK LEILDLSDNL FNSRIFPFLN SATSLKSLSL WGNNMGGPFP AKELRDLTNV
201: ELLDLSRNRF NGSIPVRALF ALRKLKALDL SDNEFSSSVE LQGKFAKTKP LSGTCPWKNM EELKLSNNKL AGQFPLCLTS LTGLRVLDLS SNQLTGNVPS
301: ALANLESLEY LSLFGNNFEG FFSLGLLANL SKLKVLRLDS QSNSLEVEFE TSWKPKFQLV VIALRSCNLE KVPHFLLHQK DLHHVDLSDN QIHGNFPSWL
401: LENNTKLEVL LLQNNSFTSF QLPKSAHNLL FLNVSVNKFN HLFLQNFGWI LPHLVCVNLA YNGFQGNLPS SLDNMKSIEF LDLSHNRFHG KLPRRFLKGC
501: YNLTILKLSH NKLSGEVFPE AANFTRLWVM SMDNNLFTGN IGKGFRSLPS LNVLDISNNK LTGVIPSWIG ERQGLFALQL SNNMLEGEIP TSLFNISYLQ
601: LLDLSSNRLS GDIPPHVSSI YHGAVLLLQN NNLSGVIPDT LLLNVIVLDL RNNRLSGNLP EFINTQNISI LLLRGNNFTG QIPHQFCSLS NIQLLDLSNN
701: KFNGSIPSCL SNTSFGLRKG DDSYRYDVPS RFGTAKDPVY FESLLMIDEF NMVNETNSQT KIEFATKHRY DAYMGGNLKL LFGMDLSENE LSGEIPVELG
801: GLVELEALNL SHNNLSGVIL ESFSGLKNVE SLDLSFNRLQ GPIPLQLTDM ISLAVFNVSY NNLSGIVPQG RQFNTFETQS YFGNPLLCGK SIDISCASNN
901: FHPTDNGVEA DESTVDMESF YWSFVAAYVT ILLGILASLS FDSPWSRAWF YIVDAFVLKV RNMLWQNTAG TKCSYVLVSL SSPSVVVLLK PPALFHKTRT

Arabidopsis Description

AtRLP13Receptor-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6A6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.