Factsheet for GSMUA_Achr3P18780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66377	Canola	cytosol, plastid, vacuole	27.53	37.26
CDY16355	Canola	cytosol, plastid, vacuole	27.35	37.02
Zm00001d041327_P002	Maize	mitochondrion	45.47	35.7
CDY49128	Canola	vacuole	25.4	35.05
Os08t0322500-00	Rice	cytosol	45.47	34.88
Os03t0400800-00	Rice	plasma membrane	46.36	34.66
CDY42431	Canola	plasma membrane	32.33	34.47
KXG23808	Sorghum	plasma membrane	45.83	34.08
TraesCS7D01G424900.1	Wheat	plasma membrane	44.41	33.2
Bra008139.1-P	Field mustard	cytosol	46.36	33.12
OQU79417	Sorghum	plasma membrane	42.63	32.74
GSMUA_Achr6P23960_001	Banana	cytosol	41.39	32.68
HORVU7Hr1G099370.4	Barley	cytosol	43.34	32.02
Os07t0597200-01	Rice	plasma membrane	55.95	28.48
TraesCS2D01G190200.2	Wheat	plasma membrane	54.35	27.57
TraesCS2B01G208900.1	Wheat	plasma membrane	54.35	27.52
KRH03535	Soybean	plasma membrane	53.11	27.41
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	40.14	27.36
VIT_17s0000g06710.t01	Wine grape	plasma membrane	53.46	27.34
TraesCS2A01G182400.1	Wheat	plasma membrane	53.82	27.3
AT1G74360.1	Thale cress	plasma membrane	52.75	26.85
HORVU2Hr1G034370.1	Barley	plasma membrane	53.46	26.85
Bra015917.1-P	Field mustard	cytosol	51.51	26.75
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	41.74	26.7
PGSC0003DMT400063400	Potato	plasma membrane	51.33	26.44
Zm00001d022044_P001	Maize	plasma membrane	51.69	26.43
TraesCS2D01G053000.1	Wheat	plasma membrane	47.25	26.39
EER99654	Sorghum	plasma membrane	51.51	26.39
Solyc03g115610.2.1	Tomato	plasma membrane	51.15	26.37
CDX73079	Canola	plasma membrane	51.69	25.96
CDX96537	Canola	plasma membrane	51.51	25.85
KRH56872	Soybean	plasma membrane	52.75	25.71
Solyc06g069650.2.1	Tomato	plasma membrane	49.56	25.39
KRH63281	Soybean	plasma membrane	48.67	25.16
PGSC0003DMT400083089	Potato	plasma membrane	49.38	25.14
KRH54609	Soybean	plasma membrane	48.13	24.35
GSMUA_AchrUn_...	Banana	plasma membrane	27.0	18.91
GSMUA_Achr6P35950_001	Banana	plasma membrane	28.95	18.15
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	27.89	17.78
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	25.22	17.3
GSMUA_Achr2P05500_001	Banana	plasma membrane	23.27	16.86
GSMUA_Achr9P19060_001	Banana	plasma membrane	23.45	16.79
GSMUA_Achr2P15100_001	Banana	plasma membrane	20.96	15.45
GSMUA_Achr8P00900_001	Banana	plasma membrane	24.51	13.73
GSMUA_Achr5P25270_001	Banana	plasma membrane	19.89	13.25

Protein Annotations

MapMan:26.8.1.3.1	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr3G18780_001	EnsemblPlants:GSMUA_Achr3P18780_001	EnsemblPlants:GSMUA_Achr3T18780_001	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SFU4
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR27000	PANTHER:PTHR27000:SF54	SMART:SM00369
SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI000294D604	SEG:seg	:	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:GMGC_GENE;Acc:GSMUA_Achr3G18780_001]

Coordinates

chr3:+:20155090..20158055

Molecular Weight (calculated)

61682.8 Da

IEP (calculated)

7.046

GRAVY (calculated)

-0.114

Length

563 amino acids

Sequence
(BLAST)

001: MIEYFTFGSE VLLQLKGSLE ANNPIRRGAY ARWNASDSSP CNWPGITCND ADRVTGINLA ESNINGEIFP NFHLLTELTR LDLSSNTIGG SVPADLNKCS
101: ALEHLNLSSN NLLTGELSLD LRDNAFNGEV PSGIGSLSEL NSLRLGNNAF DRTIPEELLN CSKLVFLDFS NHDFGGDIPE IFGRFVTLDH LILYGNQFFG
201: NLPVEITTMP KIKILILADN EFSGSIPPEV GGMARLQLLD LSYNNLTGSI PLAIGNLTSL LWLTLAGNDL TGNIPPEIGN CSSLMWLNLA NNRLSGRIPP
301: EISAIGRDPN PTFEANRREI RHVTPISGDC LTMNRWLPAS YPPFNFVYTL LTKWTCRTTW NRLLQGYAIG RMRNFSMIQL DGNRLSGRLP QEIGQLPLVI
401: LNVSSNRLSG EIPHEIGGLR CLTILDLSQN NFSGKLPSSL NGLSELNKFN LSYNPWLSGT VPMTGQIATF DRDSFLGDPL ISFSASSNGG ASFGSPPPPP
501: LARNSSAAGG GGRWKSVLLG VFIALTLAFV GTLTRTAVRC WRRRELLARA EEEGRRRGTR RRC

Best Arabidopsis Sequence Match ( AT1G74360.1 )
(BLAST)

0001: MTMVTRVIMT DDDSQSLCFL CFLLFFFITA IAVAGDSLDS DREVLLSLKS YLESRNPQNR GLYTEWKMEN QDVVCQWPGI ICTPQRSRVT GINLTDSTIS
0101: GPLFKNFSAL TELTYLDLSR NTIEGEIPDD LSRCHNLKHL NLSHNILEGE LSLPGLSNLE VLDLSLNRIT GDIQSSFPLF CNSLVVANLS TNNFTGRIDD
0201: IFNGCRNLKY VDFSSNRFSG EVWTGFGRLV EFSVADNHLS GNISASMFRG NCTLQMLDLS GNAFGGEFPG QVSNCQNLNV LNLWGNKFTG NIPAEIGSIS
0301: SLKGLYLGNN TFSRDIPETL LNLTNLVFLD LSRNKFGGDI QEIFGRFTQV KYLVLHANSY VGGINSSNIL KLPNLSRLDL GYNNFSGQLP TEISQIQSLK
0401: FLILAYNNFS GDIPQEYGNM PGLQALDLSF NKLTGSIPAS FGKLTSLLWL MLANNSLSGE IPREIGNCTS LLWFNVANNQ LSGRFHPELT RMGSNPSPTF
0501: EVNRQNKDKI IAGSGECLAM KRWIPAEFPP FNFVYAILTK KSCRSLWDHV LKGYGLFPVC SAGSTVRTLK ISAYLQLSGN KFSGEIPASI SQMDRLSTLH
0601: LGFNEFEGKL PPEIGQLPLA FLNLTRNNFS GEIPQEIGNL KCLQNLDLSF NNFSGNFPTS LNDLNELSKF NISYNPFISG AIPTTGQVAT FDKDSFLGNP
0701: LLRFPSFFNQ SGNNTRKISN QVLGNRPRTL LLIWISLALA LAFIACLVVS GIVLMVVKAS REAEIDLLDG SKTRHDMTSS SGGSSPWLSG KIKVIRLDKS
0801: TFTYADILKA TSNFSEERVV GRGGYGTVYR GVLPDGREVA VKKLQREGTE AEKEFRAEME VLSANAFGDW AHPNLVRLYG WCLDGSEKIL VHEYMGGGSL
0901: EELITDKTKL QWKKRIDIAT DVARGLVFLH HECYPSIVHR DVKASNVLLD KHGNARVTDF GLARLLNVGD SHVSTVIAGT IGYVAPEYGQ TWQATTRGDV
1001: YSYGVLTMEL ATGRRAVDGG EECLVEWARR VMTGNMTAKG SPITLSGTKP GNGAEQMTEL LKIGVKCTAD HPQARPNMKE VLAMLVKISG KAELFNGLSS
1101: QGYIEM

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:UniProtKB/Swiss-Prot;Acc:C0LGJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.