Factsheet for GSMUA_Achr1P05250_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P02160_001
GSMUA_Achr1P05250_001
GSMUA_Achr1P15240_001
GSMUA_Achr2P05500_001	plasma membrane
GSMUA_Achr2P14850_001
GSMUA_Achr4P08920_001
GSMUA_Achr4P29650_001
GSMUA_Achr5P11610_001
GSMUA_Achr5P13880_001
GSMUA_Achr5P13910_001
GSMUA_Achr5P19040_001
GSMUA_Achr6P35950_001
GSMUA_Achr7P11620_001
GSMUA_Achr7P17210_001
GSMUA_Achr8P13240_001
GSMUA_Achr9P19060_001	plasma membrane
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39400.1	GSMUA_Achr10P...	AT1G71830.1	16473966
AT4G39400.1	GSMUA_Achr10P...	AT1G71830.1	16473966
AT4G39400.1	GSMUA_Achr2P14850_001	AT1G71830.1	16473966
AT4G39400.1	GSMUA_Achr7P11620_001	AT1G71830.1	16473966
AT4G39400.1	GSMUA_Achr7P17210_001	AT1G71830.1	16473966
AT4G39400.1	GSMUA_AchrUn_...	AT1G71830.1	16473966
AT4G39400.1	GSMUA_Achr2P05500_001	AT3G13380.1	24064770
AT4G39400.1	GSMUA_Achr9P19060_001	AT3G13380.1	24064770
AT4G39400.1	GSMUA_Achr1P15240_001	AT4G00710.1	18653891
AT4G39400.1	GSMUA_Achr11P...	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr1P02160_001	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr4P29650_001	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr5P11610_001	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr5P19040_001	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr8P13240_001	AT4G35230.1	18653891
AT4G39400.1	GSMUA_Achr1P05250_001	AT4G39400.1	15935775
AT4G39400.1	GSMUA_Achr4P08920_001	AT4G39400.1	15935775
AT4G39400.1	GSMUA_Achr6P35950_001	AT4G39400.1	15935775
AT4G39400.1	GSMUA_AchrUn_...	AT4G39400.1	15935775
AT4G39400.1	GSMUA_Achr1P05250_001	AT4G39400.1	16473966
AT4G39400.1	GSMUA_Achr4P08920_001	AT4G39400.1	16473966
AT4G39400.1	GSMUA_Achr6P35950_001	AT4G39400.1	16473966
AT4G39400.1	GSMUA_AchrUn_...	AT4G39400.1	16473966
AT4G39400.1	GSMUA_Achr5P13880_001	AT5G58220.1	15319482
AT4G39400.1	GSMUA_Achr5P13910_001	AT5G58220.1	15319482

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	72.72	74.25
GSMUA_Achr6P35950_001	Banana	plasma membrane	70.65	64.59
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	60.05	55.83
CDY66904	Canola	cytosol, peroxisome, plasma membrane	29.72	51.37
TraesCS3A01G245000.1	Wheat	plasma membrane	62.12	45.41
TraesCS3D01G246500.1	Wheat	plasma membrane	61.88	45.2
Os01t0718300-01	Rice	plasma membrane	61.27	44.87
Zm00001d043634_P001	Maize	plasma membrane	60.66	44.7
EES03532	Sorghum	plasma membrane	60.78	44.55
Zm00001d011721_P001	Maize	plasma membrane	60.78	44.47
HORVU3Hr1G068000.2	Barley	plastid	61.51	43.16
HORVU3Hr1G068010.1	Barley	plasma membrane	30.09	42.66
TraesCS3B01G275000.1	Wheat	plasma membrane, plastid	61.88	42.19
VIT_07s0031g01850.t01	Wine grape	plasma membrane	60.29	41.08
CDY12143	Canola	plasma membrane	53.35	40.93
CDY53185	Canola	plasma membrane	53.11	40.6
KRH64131	Soybean	plasma membrane	58.34	40.35
KRH53813	Soybean	plasma membrane	57.61	39.95
CDX72702	Canola	plasma membrane	54.57	39.68
AT4G39400.1	Thale cress	plasma membrane, vacuole	57.37	39.38
CDY41977	Canola	plasma membrane	53.96	39.34
HORVU3Hr1G068020.2	Barley	cytosol	40.32	39.31
PGSC0003DMT400050728	Potato	golgi, plasma membrane, vacuole	57.49	39.14
Bra010684.1-P	Field mustard	plasma membrane	55.79	39.01
Solyc04g051510.1.1	Tomato	golgi, plasma membrane, vacuole	57.13	38.86
Bra033615.1-P	Field mustard	plasma membrane	55.79	38.36
Bra011862.1-P	Field mustard	plasma membrane	55.66	38.27
CDX90332	Canola	plasma membrane	51.4	38.16
GSMUA_Achr9P19060_001	Banana	plasma membrane	35.2	36.77
GSMUA_Achr2P15100_001	Banana	plasma membrane	34.1	36.65
GSMUA_Achr2P05500_001	Banana	plasma membrane	34.1	36.04
TraesCS3B01G551200.1	Wheat	plasma membrane	44.58	33.89
TraesCS3B01G550900.1	Wheat	plasma membrane	43.61	33.06
TraesCS3D01G496100.1	Wheat	plasma membrane	43.36	32.9
OQU86764	Sorghum	plasma membrane	39.59	32.73
Zm00001d014769_P001	Maize	cytosol, extracellular, nucleus	10.23	29.37
TraesCS3A01G490100.1	Wheat	plasma membrane	30.09	27.6
GSMUA_Achr3P18780_001	Banana	cytosol	17.3	25.22
GSMUA_Achr5P25270_001	Banana	plasma membrane	25.82	25.09
CDY66903	Canola	extracellular	12.67	24.94
GSMUA_Achr8P00900_001	Banana	plasma membrane	30.33	24.78
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	23.39	23.24
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	23.26	21.7
GSMUA_Achr6P23960_001	Banana	cytosol	18.64	21.46

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.1490.310	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G05250_001
EnsemblPlants:GSMUA_Achr1P05250_001	EnsemblPlants:GSMUA_Achr1T05250_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0RX83	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296257F	SEG:seg

Description

Putative Systemin receptor SR160 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05250_001]

Coordinates

chr1:-:4352977..4356366

Molecular Weight (calculated)

88196.9 Da

IEP (calculated)

6.414

GRAVY (calculated)

0.017

Length

821 amino acids

Sequence
(BLAST)

001: MVGRERRRSS SSAFFFCLAC LLCFLGIAFG SGDAGDLELL MSFKAAVANP QLLPSWDHLG GGPCSFSGVI CSPGGRVAGV VLQGVSLGAD FRAVSLSDID
101: LSGNGLWGSL AEISSLAAAC PGLRSLNLSG NSVGVSREDE LRWLLSNLGS VRRLDLAGNR FSDGIPAIPN CSYLQHLDLS MSGLSGEISV GVFSGCRSLT
201: YLNLSSNHLT GTLPSDLSSC TSLVSLSLSN NNFSGELPLE TLISMPHLKT LELAFNNLTG SLGDLITKMP MLETLYLQNN QLTGRIPESL SNCTKLNLIL
301: DNNDLTGGLI PSWIGQLRNL AILKLGNNSF SGSIPPDLGD CRSLIWLDLS NNQLNGSIPP ALADHLQFCN FTRVYKGITQ YTFNNNGSML FLDLSYNQLS
401: GEIPKKFGSM YHLLILNLGH NMLSGPIPPE LGSLRYAAGL DLSHNALEGP IPPSFSGLAM LSEIDLSNNK LNGSIPELGQ LATFPRYRYE NNSGLCGFPL
501: PSCKDLAGPK SSTQHGRSHH GQASLAGSIA MGLLFSLSNW KLTATKDALA INLSTFEMPL KNLSFVDLVE ATNGFHNDFL IGSGGFGDVY RAQLKDGSVV
601: AIKKLKHVSG QGDREFTAEM ETIGKIKHCN LVKIKLNWAA RRIIALGAAR ARVSDFGMAR QMSAVDTHLS VSALAGTPGY VPPEYYQSFR CTTNGDVYSY
701: GVVLLELLTG RRSTGSTDFG DNNLVGWVKQ HSKLRISDVF DPELLQEDPH LELELLEHLK IACACLDDRP LRRPTMLEVM TMLKSIQAGS TVNTMYSAPA
801: ASNGGCCEGD MTLTDGREAK E

Best Arabidopsis Sequence Match ( AT4G39400.1 )
(BLAST)

0001: MKTFSSFFLS VTTLFFFSFF SLSFQASPSQ SLYREIHQLI SFKDVLPDKN LLPDWSSNKN PCTFDGVTCR DDKVTSIDLS SKPLNVGFSA VSSSLLSLTG
0101: LESLFLSNSH INGSVSGFKC SASLTSLDLS RNSLSGPVTT LTSLGSCSGL KFLNVSSNTL DFPGKVSGGL KLNSLEVLDL SANSISGANV VGWVLSDGCG
0201: ELKHLAISGN KISGDVDVSR CVNLEFLDVS SNNFSTGIPF LGDCSALQHL DISGNKLSGD FSRAISTCTE LKLLNISSNQ FVGPIPPLPL KSLQYLSLAE
0301: NKFTGEIPDF LSGACDTLTG LDLSGNHFYG AVPPFFGSCS LLESLALSSN NFSGELPMDT LLKMRGLKVL DLSFNEFSGE LPESLTNLSA SLLTLDLSSN
0401: NFSGPILPNL CQNPKNTLQE LYLQNNGFTG KIPPTLSNCS ELVSLHLSFN YLSGTIPSSL GSLSKLRDLK LWLNMLEGEI PQELMYVKTL ETLILDFNDL
0501: TGEIPSGLSN CTNLNWISLS NNRLTGEIPK WIGRLENLAI LKLSNNSFSG NIPAELGDCR SLIWLDLNTN LFNGTIPAAM FKQSGKIAAN FIAGKRYVYI
0601: KNDGMKKECH GAGNLLEFQG IRSEQLNRLS TRNPCNITSR VYGGHTSPTF DNNGSMMFLD MSYNMLSGYI PKEIGSMPYL FILNLGHNDI SGSIPDEVGD
0701: LRGLNILDLS SNKLDGRIPQ AMSALTMLTE IDLSNNNLSG PIPEMGQFET FPPAKFLNNP GLCGYPLPRC DPSNADGYAH HQRSHGRRPA SLAGSVAMGL
0801: LFSFVCIFGL ILVGREMRKR RRKKEAELEM YAEGHGNSGD RTANNTNWKL TGVKEALSIN LAAFEKPLRK LTFADLLQAT NGFHNDSLIG SGGFGDVYKA
0901: ILKDGSAVAI KKLIHVSGQG DREFMAEMET IGKIKHRNLV PLLGYCKVGD ERLLVYEFMK YGSLEDVLHD PKKAGVKLNW STRRKIAIGS ARGLAFLHHN
1001: CSPHIIHRDM KSSNVLLDEN LEARVSDFGM ARLMSAMDTH LSVSTLAGTP GYVPPEYYQS FRCSTKGDVY SYGVVLLELL TGKRPTDSPD FGDNNLVGWV
1101: KQHAKLRISD VFDPELMKED PALEIELLQH LKVAVACLDD RAWRRPTMVQ VMAMFKEIQA GSGIDSQSTI RSIEDGGFST IEMVDMSIKE VPEGKL

Arabidopsis Description

BRI1Protein BRASSINOSTEROID INSENSITIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:O22476]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.