Factsheet for GSMUA_Achr11P22440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr6P19930_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	GSMUA_Achr1P05250_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr4P08920_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P35950_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_AchrUn_...	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P19930_001	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0542800-01	Rice	cytosol, plasma membrane	25.88	85.44
HORVU1Hr1G052420.3	Barley	cytosol	57.94	77.87
GSMUA_Achr5P11610_001	Banana	cytosol	90.29	61.16
GSMUA_Achr5P19040_001	Banana	plasma membrane	92.94	60.65
GSMUA_Achr4P29650_001	Banana	cytosol	87.65	59.36
VIT_03s0038g03270.t01	Wine grape	cytosol	86.47	58.8
Zm00001d048345_P003	Maize	plastid	86.47	57.65
CDX69121	Canola	cytosol	85.0	57.11
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	86.47	57.09
Zm00001d027523_P001	Maize	plasma membrane	85.88	57.03
CDX75483	Canola	cytosol	85.0	56.67
Bra011596.1-P	Field mustard	cytosol	85.29	56.64
AT4G35230.1	Thale cress	cytosol	85.29	56.64
EER95565	Sorghum	plastid	85.88	56.59
Bra020806.1-P	Field mustard	cytosol	84.12	56.41
CDX76321	Canola	cytosol	84.12	56.41
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	85.0	56.34
CDY17529	Canola	cytosol	83.53	56.02
KRH14029	Soybean	cytosol	81.76	55.94
TraesCS4B01G328200.1	Wheat	plastid	85.88	55.83
TraesCS5A01G500000.1	Wheat	plastid	85.59	55.53
TraesCS1A01G203400.1	Wheat	plastid	85.59	55.53
TraesCS1B01G217500.1	Wheat	plastid	85.59	55.32
TraesCS4D01G325200.1	Wheat	plastid	84.71	55.28
Os03t0132800-01	Rice	plasma membrane	86.18	55.18
TraesCS1D01G206900.1	Wheat	plastid	85.29	55.03
KRH74087	Soybean	mitochondrion	81.47	54.42
EER94565	Sorghum	plastid	82.35	53.44
HORVU1Hr1G052350.2	Barley	plastid	85.0	51.24
Zm00001d029785_P001	Maize	plastid	82.35	50.27
GSMUA_Achr1P15240_001	Banana	cytosol	64.41	44.51
GSMUA_Achr11P...	Banana	cytosol	62.65	43.29
GSMUA_Achr4P12250_001	Banana	cytosol	62.65	42.6
GSMUA_Achr4P05600_001	Banana	cytosol	61.47	42.57
GSMUA_Achr10P...	Banana	mitochondrion, plastid	62.06	42.54
GSMUA_Achr8P02400_001	Banana	plastid	60.88	42.16
GSMUA_Achr1P02160_001	Banana	cytosol	66.76	41.88
OQU78897	Sorghum	cytosol, golgi, plastid	38.53	35.41
HORVU0Hr1G000450.1	Barley	plastid	27.35	33.21
Bra034987.1-P	Field mustard	cytosol	2.35	4.94

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G22440_001	EnsemblPlants:GSMUA_Achr11P22440_001	EnsemblPlants:GSMUA_Achr11T22440_001	InterPro:IPR000719
InterPro:IPR011990	InterPro:Kinase-like_dom_sf	UniProt:M0RUH4	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000294F884

Description

Probable serine/threonine-protein kinase At4g35230 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22440_001]

Coordinates

chr11:-:22725965..22733542

Molecular Weight (calculated)

38459.0 Da

IEP (calculated)

5.133

GRAVY (calculated)

-0.404

Length

340 amino acids

Sequence
(BLAST)

001: MRLRVAFYIA EALEYCSNEG RPLYHDLNAY RVLFDEDGDP RLSCFGLMKN SRDGKSYSTN LAYTPPEYLR NGRVTPESVI FSFGTVLLDL LSGKRIPPTH
101: ALDMIRGKNS LVLMDSHLEG NFSTEEATTL VDLASQCLQY EPRDRPNTKK LVATLASLQI KLEEPSYVML GIQKPEEAPA TPPHPLSPMG EACSRMDLTA
201: IHQILVMTHY RDDEGTNELS FQEWTQQMRD ILDARKRGDF AFRDKDFKTA IECYSQFLDV GTMVSPTIYA RRSLCHLMCD QPDAALRDAM QAQCVYPDWP
301: TAFYMQAVAL AKLDMQSDAA DMLHEATMLE EKRQKGGKGP

Best Arabidopsis Sequence Match ( AT1G50990.1 )
(BLAST)

001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS

Arabidopsis Description

BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.